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全基因组关联研究鉴定了自我报告的习惯性睡眠时长的遗传位点,这些时长是通过加速度计估计得出的。

Genome-wide association study identifies genetic loci for self-reported habitual sleep duration supported by accelerometer-derived estimates.

机构信息

Center for Genomic Medicine, Massachusetts General Hospital and Harvard Medical School, Boston, 02114, MA, USA.

Broad Institute, Cambridge, 02142, MA, USA.

出版信息

Nat Commun. 2019 Mar 7;10(1):1100. doi: 10.1038/s41467-019-08917-4.

Abstract

Sleep is an essential state of decreased activity and alertness but molecular factors regulating sleep duration remain unknown. Through genome-wide association analysis in 446,118 adults of European ancestry from the UK Biobank, we identify 78 loci for self-reported habitual sleep duration (p < 5 × 10; 43 loci at p < 6 × 10). Replication is observed for PAX8, VRK2, and FBXL12/UBL5/PIN1 loci in the CHARGE study (n = 47,180; p < 6.3 × 10), and 55 signals show sign-concordant effects. The 78 loci further associate with accelerometer-derived sleep duration, daytime inactivity, sleep efficiency and number of sleep bouts in secondary analysis (n = 85,499). Loci are enriched for pathways including striatum and subpallium development, mechanosensory response, dopamine binding, synaptic neurotransmission and plasticity, among others. Genetic correlation indicates shared links with anthropometric, cognitive, metabolic, and psychiatric traits and two-sample Mendelian randomization highlights a bidirectional causal link with schizophrenia. This work provides insights into the genetic basis for inter-individual variation in sleep duration implicating multiple biological pathways.

摘要

睡眠是一种活动和警觉性降低的基本状态,但调节睡眠时间的分子因素仍不清楚。通过对英国生物库中 446118 名欧洲血统成年人进行全基因组关联分析,我们确定了 78 个与自我报告的习惯性睡眠时间相关的基因座(p<5×10-8;43 个基因座在 p<6×10-8 时达到显著水平)。在 CHARGE 研究中,PAX8、VRK2 和 FBXL12/UBL5/PIN1 基因座在复制观察中(n=47180;p<6.3×10-8),55 个信号显示出一致的效应。在二次分析中(n=85499),这 78 个基因座与加速度计测量的睡眠时间、白天不活动、睡眠效率和睡眠次数进一步相关。这些基因座在包括纹状体和皮质下发育、机械感觉反应、多巴胺结合、突触神经传递和可塑性在内的途径中富集。遗传相关性表明与人体测量、认知、代谢和精神特质存在共享联系,双样本孟德尔随机化强调了与精神分裂症的双向因果关系。这项工作为个体间睡眠时间差异的遗传基础提供了深入了解,涉及多个生物学途径。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0980/6405943/f2e98a8be0e7/41467_2019_8917_Fig1_HTML.jpg

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