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差异基因表达支持在形成赤潮的甲藻中,群体生产具有资源密集型和防御作用。

Differential Gene Expression Supports a Resource-Intensive, Defensive Role for Colony Production in the Bloom-Forming Haptophyte, Phaeocystis globosa.

机构信息

Marine Biophysics Unit, Okinawa Institute of Science and Technology Graduate University, Onna-Son, Japan.

出版信息

J Eukaryot Microbiol. 2019 Sep;66(5):788-801. doi: 10.1111/jeu.12727. Epub 2019 Mar 27.

DOI:10.1111/jeu.12727
PMID:30860641
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6766888/
Abstract

Phaeocystis globosa forms dense, monospecific blooms in temperate, northern waters. Blooms are usually dominated by the colonial morphotype-nonflagellated cells embedded in a secreted mucilaginous mass. Colonial Phaeocystis blooms significantly affect food-web structure and function and negatively impact fisheries and aquaculture, but factors regulating colony formation remain enigmatic. Destructive P. globosa blooms have been reported in tropical and subtropical regions more recently and warm-water blooms could become more common with continued climate change and coastal eutrophication. We therefore assessed genetic pathways associated with colony formation by investigating differential gene expression between colonial and solitary cells of a warm-water P. globosa strain. Our results illustrate a transcriptional shift in colonial cells with most of the differentially expressed genes downregulated, supporting a reallocation of resources associated with forming and maintaining colonies. Dimethylsulfide and acrylate production and pathogen interaction pathways were upregulated in colonial cells, suggesting a defensive role for producing colonies. We identify several protein kinase signaling pathways that may influence the transition between morphotypes, providing targets for future research into factors affecting colony formation. This study provides novel insights into genetic mechanisms involved in Phaeocystis colony formation and provides new evidence supporting a defensive role for Phaeocystis colonies.

摘要

胶球藻形成密集的、单种的藻华于温带北部水域。藻华通常由不具鞭毛的细胞组成的群体形态为主,这些细胞嵌入在分泌的黏液状物质中。群体胶球藻的藻华显著影响食物网的结构和功能,并对渔业和水产养殖产生负面影响,但调节群体形成的因素仍然是个谜。最近在热带和亚热带地区也报道了具有破坏性的胶球藻藻华,随着气候变化和沿海富营养化的持续,温水藻华可能会变得更加普遍。因此,我们通过研究温水胶球藻株的群体细胞和单体细胞之间的差异表达基因,评估了与群体形成相关的遗传途径。我们的研究结果表明,群体细胞中存在转录变化,大多数差异表达的基因下调,这支持了与形成和维持群体相关的资源重新分配。二甲基硫和丙烯酸盐的产生以及病原体相互作用途径在群体细胞中上调,表明形成群体具有防御作用。我们确定了几种蛋白激酶信号通路,这些通路可能会影响形态之间的转变,为未来研究影响群体形成的因素提供了目标。本研究为胶球藻群体形成的遗传机制提供了新的见解,并为胶球藻群体的防御作用提供了新的证据。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8cfa/6766888/4d6932e067e7/JEU-66-788-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8cfa/6766888/e043323c61b3/JEU-66-788-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8cfa/6766888/b4ac0e8c1e40/JEU-66-788-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8cfa/6766888/df3ec120fe94/JEU-66-788-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8cfa/6766888/76724e3dbf0d/JEU-66-788-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8cfa/6766888/4d6932e067e7/JEU-66-788-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8cfa/6766888/e043323c61b3/JEU-66-788-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8cfa/6766888/b4ac0e8c1e40/JEU-66-788-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8cfa/6766888/df3ec120fe94/JEU-66-788-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8cfa/6766888/76724e3dbf0d/JEU-66-788-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8cfa/6766888/4d6932e067e7/JEU-66-788-g005.jpg

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2
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3
De novo transcriptome of the cosmopolitan dinoflagellate Amphidinium carterae to identify enzymes with biotechnological potential.具有生物技术潜力的广生甲藻 Amphidinium carterae 从头转录组鉴定酶。
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4
Flexible B ecophysiology of due to a fusion B-independent methionine synthase with widespread homologues.由于与广泛同源物融合的 B 独立甲硫氨酸合成酶, 具有灵活的 B 型 ecophysiology。
Proc Natl Acad Sci U S A. 2024 Feb 6;121(6):e2204075121. doi: 10.1073/pnas.2204075121. Epub 2024 Feb 2.
5
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Sci Data. 2023 Dec 21;10(1):926. doi: 10.1038/s41597-023-02842-4.
6
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7
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8
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5
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