Department of Life Sciences, University of Trieste, 34127 Trieste, Italy.
Cluster in Biomedicine, Area Science Park, 34149 Trieste, Italy.
Cells. 2019 Mar 16;8(3):254. doi: 10.3390/cells8030254.
Members of the tripartite motif family of E3 ubiquitin ligases are characterized by the presence of a conserved N-terminal module composed of a RING domain followed by one or two B-box domains, a coiled-coil and a variable C-terminal region. The RING and B-box are both Zn-binding domains but, while the RING is found in a large number of proteins, the B-box is exclusive to the tripartite motif (TRIM) family members in metazoans. Whereas the RING has been extensively characterized and shown to possess intrinsic E3 ligase catalytic activity, much less is known about the role of the B-box domains. In this study, we adopted an in vitro approach using recombinant point- and deletion-mutants to characterize the contribution of the TRIM32 Zn-binding domains to the activity of this E3 ligase that is altered in a genetic form of muscular dystrophy. We found that the RING domain is crucial for E3 ligase activity and E2 specificity, whereas a complete B-box domain is involved in chain assembly rate modulation. Further, in vitro, the RING domain is necessary to modulate TRIM32 oligomerization, whereas, in cells, both the RING and B-box cooperate to specify TRIM32 subcellular localization, which if altered may impact the pathogenesis of diseases.
三聚体基序家族的 E3 泛素连接酶成员的特征是存在一个保守的 N 端模块,由一个 RING 结构域和一个或两个 B 盒结构域、一个卷曲螺旋和一个可变的 C 端区域组成。RING 和 B 盒都是 Zn 结合结构域,但 RING 存在于大量蛋白质中,而 B 盒则是真核生物三聚体基序(TRIM)家族成员所独有的。虽然 RING 已经被广泛研究并显示出具有内在的 E3 连接酶催化活性,但对 B 盒结构域的作用知之甚少。在这项研究中,我们采用了一种体外方法,使用重组点突变和缺失突变体来研究 TRIM32Zn 结合结构域对这种 E3 连接酶活性的贡献,这种连接酶在遗传性肌肉萎缩症中发生改变。我们发现 RING 结构域对于 E3 连接酶活性和 E2 特异性至关重要,而完整的 B 盒结构域参与了链组装速率的调节。此外,在体外,RING 结构域对于调节 TRIM32 寡聚化是必需的,而在细胞中,RING 和 B 盒共同决定了 TRIM32 的亚细胞定位,如果发生改变,可能会影响疾病的发病机制。