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基于快速蒸发解吸电离质谱(REIMS)数据的牛肉属性预测建模的机器学习算法比较。

Comparison of Machine Learning Algorithms for Predictive Modeling of Beef Attributes Using Rapid Evaporative Ionization Mass Spectrometry (REIMS) Data.

机构信息

Center for Meat Safety and Quality, Department of Animal Sciences, Colorado State University, Fort Collins, CO, 80523, USA.

Department of Mathematics and Statistics, East Tennessee State University, Johnson City, TN, 37614, USA.

出版信息

Sci Rep. 2019 Apr 5;9(1):5721. doi: 10.1038/s41598-019-40927-6.

DOI:10.1038/s41598-019-40927-6
PMID:30952873
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6450883/
Abstract

Ambient mass spectrometry is an analytical approach that enables ionization of molecules under open-air conditions with no sample preparation and very fast sampling times. Rapid evaporative ionization mass spectrometry (REIMS) is a relatively new type of ambient mass spectrometry that has demonstrated applications in both human health and food science. Here, we present an evaluation of REIMS as a tool to generate molecular scale information as an objective measure for the assessment of beef quality attributes. Eight different machine learning algorithms were compared to generate predictive models using REIMS data to classify beef quality attributes based on the United States Department of Agriculture (USDA) quality grade, production background, breed type and muscle tenderness. The results revealed that the optimal machine learning algorithm, as assessed by predictive accuracy, was different depending on the classification problem, suggesting that a "one size fits all" approach to developing predictive models from REIMS data is not appropriate. The highest performing models for each classification achieved prediction accuracies between 81.5-99%, indicating the potential of the approach to complement current methods for classifying quality attributes in beef.

摘要

环境质谱是一种分析方法,它可以在无需样品制备且采样时间非常快的开放空气条件下使分子离子化。快速蒸发电离质谱(REIMS)是一种相对较新的环境质谱,已在人类健康和食品科学领域得到了应用。在这里,我们评估了 REIMS 作为一种生成分子尺度信息的工具,作为评估牛肉质量属性的客观度量。比较了八种不同的机器学习算法,以使用 REIMS 数据生成预测模型,根据美国农业部(USDA)质量等级、生产背景、品种类型和肌肉嫩度对牛肉质量属性进行分类。结果表明,根据预测准确性评估,最佳机器学习算法因分类问题而异,这表明从 REIMS 数据开发预测模型的“一刀切”方法并不合适。每个分类中表现最佳的模型的预测准确率在 81.5-99%之间,表明该方法有潜力补充当前用于分类牛肉质量属性的方法。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9a76/6450883/0ce8ba9e7f15/41598_2019_40927_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9a76/6450883/f5c105c74cef/41598_2019_40927_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9a76/6450883/da05515ce8e2/41598_2019_40927_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9a76/6450883/0ce8ba9e7f15/41598_2019_40927_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9a76/6450883/f5c105c74cef/41598_2019_40927_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9a76/6450883/da05515ce8e2/41598_2019_40927_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9a76/6450883/0ce8ba9e7f15/41598_2019_40927_Fig3_HTML.jpg

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