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HIV-TRACE (TRAnsmission Cluster Engine): a Tool for Large Scale Molecular Epidemiology of HIV-1 and Other Rapidly Evolving Pathogens.HIV-TRACE(传播簇引擎):一种用于 HIV-1 和其他快速进化病原体的大规模分子流行病学的工具。
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A Simple Symptom Score for Acute Human Immunodeficiency Virus Infection in a San Diego Community-Based Screening Program.在圣地亚哥社区为基础的筛查计划中,一种用于急性人类免疫缺陷病毒感染的简单症状评分。
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基于遗传网络分析评估男男性行为者通过互联网寻找性伴的 HIV 传播风险

Genetic Network Analysis to Assess the Risk of Human Immunodeficiency Virus Transmission Among Men Who Have Sex With Men Seeking Partners on the Internet.

机构信息

Division of Infectious Diseases and Global Public Health, University of California, San Diego, California.

San Diego Veterans Affairs Health System, California.

出版信息

Clin Infect Dis. 2020 Feb 14;70(5):925-932. doi: 10.1093/cid/ciz278.

DOI:10.1093/cid/ciz278
PMID:30953067
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7319271/
Abstract

BACKGROUND

Online partner seeking (OPS) among men who have sex with men (MSM) is associated with increased risk behavior including frequency of unprotected anal intercourse, number of partners, and incidence of sexually transmitted infections (STIs). However, the impact on transmission of human immunodeficiency virus (HIV) is uncertain.

METHODS

MSM diagnosed with acute and early HIV infection were recruited from the Primary Infection Resource Consortium. HIV transmission events in the year following infection were inferred using estimated date of infection combined with genetic network analysis with linked sequences defined as ≤0.015 sequences/site difference in the HIV type 1 (HIV-1) pol coding region. Participants completed a detailed baseline questionnaire including reported methods of meeting sexual partners, including OPS, in the prior 3 months, and regression was performed with inferred transmission as the outcome.

RESULTS

From 147 MSM who completed the questionnaire, there were an associated 20 inferred HIV transmissions. No association with OPS was found (odds ratio, 0.64 [95% confidence interval, .24-1.69]; P = .37), though individuals who reported OPS were more likely to have reported a greater number of partners (P = .003) and prior STIs (P = .002). Geospatial analysis did not indicate that OPS was associated with increased geographical reach of the user (P = .68).

CONCLUSIONS

Individuals reporting OPS did not have increased odds of inferred HIV-1 transmission in the year following infection using genetic linkage analysis despite apparently increased risk behavior. OPS also did not increase the geographic distance between genetically clustered HIV infections, suggesting that individuals mainly use the internet to meet partners in their local region.

摘要

背景

男男性行为者(MSM)中的在线伴侣寻求(OPS)与增加的风险行为有关,包括无保护肛交的频率、性伴侣的数量以及性传播感染(STI)的发生率。然而,其对人类免疫缺陷病毒(HIV)传播的影响尚不确定。

方法

从原发性感染资源联盟中招募了诊断出急性和早期 HIV 感染的 MSM。使用估计的感染日期和连锁序列的遗传网络分析推断出感染后一年内的 HIV 传播事件,将连锁序列定义为 HIV-1(HIV-1)pol 编码区中差异≤0.015 个序列/位。参与者完成了详细的基线问卷,包括报告在过去 3 个月内通过哪些方法(包括 OPS)来满足性伴侣,以及使用推断的传播作为结果进行回归。

结果

从完成问卷的 147 名 MSM 中,有 20 例相关的 HIV 传播被推断。未发现 OPS 与之相关(优势比,0.64 [95%置信区间,0.24-1.69];P =.37),尽管报告 OPS 的个体更有可能报告更多的性伴侣(P =.003)和既往性传播感染(P =.002)。地理空间分析并未表明 OPS 与用户的地理覆盖范围的增加有关(P =.68)。

结论

尽管明显增加了风险行为,但使用遗传连锁分析,报告 OPS 的个体在感染后一年内推断出 HIV-1 传播的几率并没有增加。OPS 也没有增加基因聚类 HIV 感染之间的地理距离,这表明个体主要使用互联网在其当地地区寻找伴侣。