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巴基斯坦费萨拉巴德家禽养殖场中出现的多重耐药性肠炎沙门氏菌血清型 Infantis 的检测与特征分析

Detection and characterization of multidrug-resistant Salmonella enterica serovar Infantis as an emerging threat in poultry farms of Faisalabad, Pakistan.

机构信息

National Institute for Biotechnology and Genetic Engineering, Faisalabad, Pakistan.

Pakistan Institute of Engineering and Applied Sciences, Islamabad, Pakistan.

出版信息

J Appl Microbiol. 2019 Jul;127(1):248-261. doi: 10.1111/jam.14282. Epub 2019 May 21.

Abstract

AIMS

The aim of this study was the molecular identification of Salmonella enterica serovar Infantis (S. Infantis) isolated from poultry samples and their antimicrobial resistance and virulence profiling.

METHODS AND RESULTS

A total of 149 isolates, belonging to genus Salmonella, originally isolated from 340 suspected poultry post mortem specimens reported by us earlier were preliminary identified as Salmonella by biochemical methods and confirmed by polymerase chain reaction targeting genus-specific gene invA. Targeting serovar-specific gene fragment (fljB) resulted in confirmation of 54 isolates as S. Infantis which were further confirmed by sequencing of 16S RNA and fljB genes. Swimming and swarming motilities were detected in 98·1 and 11·1% isolates respectively. Phenotypic disc diffusion assay against 23 antimicrobial agents showed the highest resistance against pefloxacin (PEF) (94·4%), chloramphenicol (83·3%) and imipenem (77·7%) while 5·3% isolates showed extended-spectrum β-lactamase production. Fifty-nine genes reported for antimicrobial resistance and 12 for conferring virulence were targeted. The most prevalent resistance gene for aminoglycosides was aadA (42·3%), for quinolone resistance determining region parE (62·5%), for penicillin's Int1 (62·9%), for chloramphenicol cat3 (66·1%) and for beta-lactams bla (44·4%). Among efflux pump coding genes, armA showed highest (74·2%) prevalence and for virulence, a high prevalence of SopE (89·2%) showed the zoonotic potential of the isolates. The activity of efflux pumps was detected through Ethidium Bromide-agar method.

CONCLUSIONS

Poultry could act as reservoirs of multidrug resistance Salmonella.

SIGNIFICANCE AND IMPACT OF THE STUDY

We firstly report the prevalence and molecular characterization of virulence/drug resistance in S. Infantis from this region and the results may contribute to designing precisely targeted therapy. This study has also highlighted the possible emergence of S. Infantis with zoonotic potential.

摘要

目的

本研究的目的是鉴定从禽类样本中分离出的肠炎沙门氏菌血清型婴儿(S. Infantis)的分子特征,以及它们的抗菌药物耐药性和毒力特征。

方法和结果

共鉴定了 149 株属沙门氏菌的分离株,这些分离株最初是由我们之前报告的 340 份疑似家禽死后标本中分离出来的,通过生化方法初步鉴定为沙门氏菌,并通过针对属特异性基因 invA 的聚合酶链反应(PCR)进行了确认。针对血清型特异性基因片段(fljB)的检测结果显示,54 株分离株为 S. Infantis,进一步通过 16S RNA 和 fljB 基因测序进行了确认。98.1%和 11.1%的分离株分别具有游泳和滑动运动性。对 23 种抗菌药物的药敏纸片扩散试验显示,对培氟沙星(PEF)(94.4%)、氯霉素(83.3%)和亚胺培南(77.7%)的耐药率最高,而 5.3%的分离株产超广谱β-内酰胺酶。针对抗菌药物耐药性和毒力的 59 个基因和 12 个基因进行了靶向检测。氨基糖苷类耐药基因最常见的是 aadA(42.3%),喹诺酮类耐药决定区 parE(62.5%),青霉素的 Int1(62.9%),氯霉素 cat3(66.1%)和β-内酰胺类 bla (44.4%)。在外排泵编码基因中,armA 的检出率最高(74.2%),对于毒力, SopE 的检出率较高(89.2%),表明分离株具有人畜共患病的潜力。通过溴化乙锭琼脂法检测外排泵的活性。

结论

禽类可能是多药耐药性沙门氏菌的储存库。

研究的意义和影响

我们首次报道了该地区婴儿肠炎沙门氏菌的毒力/耐药性流行情况和分子特征,结果可能有助于设计有针对性的精确治疗。本研究还强调了具有人畜共患病潜力的婴儿肠炎沙门氏菌可能的出现。

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