School of Life Sciences, Central China Normal University, Wuhan, Hubei, China.
Curr Genet. 2019 Oct;65(5):1121-1125. doi: 10.1007/s00294-019-00973-z. Epub 2019 Apr 16.
A fundamental question in microbiology is how bacterial cells manage to coordinate gene expression with cell growth during adapting to various environmental conditions. Although the cellular responses to changing environments have been extensively studied using transcriptomic and proteomic approaches, it remains poorly understood regarding the molecular strategy enabling bacteria to manipulate the global gene expression patterns. The alarmone (p)ppGpp is a key secondary messenger involved in regulating various biochemical and physiological processes of bacterial cells. However, despite of the extensive studies of (p)ppGpp signaling in stringent response during the past 50 years, the connection between (p)ppGpp and exponential growth remains poorly understood. Our recent work demonstrates that (p)ppGpp is strongly involved in regulating cell growth of Escherichia coli through balancing the cellular investment on metabolic proteins and ribosomes, highlighting itself as a magic governor of bacterial global resource allocation. In this mini-review, we briefly summarize some historical perspectives and current progress of the relation between (p)ppGpp and bacterial exponential growth. Two important future directions are also highlighted: the first direction is to elucidate the cellular signal that triggers (p)ppGpp accumulation during poor growth conditions; the second direction is to investigate the relation between (p)ppGpp and exponential growth for bacterial species other than E. coli.
微生物学中的一个基本问题是,细菌细胞如何在适应各种环境条件的过程中协调基因表达与细胞生长。尽管使用转录组学和蛋白质组学方法已经广泛研究了细胞对环境变化的反应,但对于使细菌能够操纵全局基因表达模式的分子策略仍知之甚少。(p)ppGpp 是一种关键的次级信使,参与调节细菌细胞的各种生化和生理过程。然而,尽管在过去的 50 年中,(p)ppGpp 信号在严格反应中的研究已经很广泛,但(p)ppGpp 与指数生长之间的联系仍知之甚少。我们最近的工作表明,(p)ppGpp 通过平衡细胞在代谢蛋白和核糖体上的投入,强烈参与调节大肠杆菌的细胞生长,凸显了自身作为细菌全局资源分配的神奇管理者的作用。在这篇迷你综述中,我们简要总结了(p)ppGpp 与细菌指数生长之间关系的一些历史观点和当前进展。还强调了两个重要的未来方向:第一个方向是阐明在生长不良条件下触发(p)ppGpp 积累的细胞信号;第二个方向是研究除大肠杆菌以外的细菌物种中(p)ppGpp 与指数生长之间的关系。