Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, 91125, USA.
Division of Geological and Planetary Sciences, California Institute of Technology, Pasadena, CA, 91125, USA.
Mol Microbiol. 2019 Jul;112(1):199-218. doi: 10.1111/mmi.14263. Epub 2019 May 3.
Bacteria in soils encounter redox-active compounds, such as phenazines, that can generate oxidative stress, but the mechanisms by which different species tolerate these compounds are not fully understood. Here, we identify two transcription factors, ActR and SoxR, that play contrasting yet complementary roles in the tolerance of the soil bacterium Agrobacterium tumefaciens to phenazines. We show that ActR promotes phenazine tolerance by proactively driving expression of a more energy-efficient terminal oxidase at the expense of a less efficient alternative, which may affect the rate at which phenazines abstract electrons from the electron transport chain (ETC) and thereby generate reactive oxygen species. SoxR, on the other hand, responds to phenazines by inducing expression of several efflux pumps and redox-related genes, including one of three copies of superoxide dismutase and five novel members of its regulon that could not be computationally predicted. Notably, loss of ActR is far more detrimental than loss of SoxR at low concentrations of phenazines, and also increases dependence on the otherwise functionally redundant SoxR-regulated superoxide dismutase. Our results thus raise the intriguing possibility that the composition of an organism's ETC may be the driving factor in determining sensitivity or tolerance to redox-active compounds.
土壤中的细菌会遇到氧化还原活性化合物,如吩嗪,这些化合物会产生氧化应激,但不同物种耐受这些化合物的机制尚未完全清楚。在这里,我们确定了两个转录因子,ActR 和 SoxR,它们在土壤细菌根瘤农杆菌对吩嗪的耐受中发挥着相反但互补的作用。我们表明,ActR 通过主动驱动更节能的末端氧化酶的表达来促进吩嗪的耐受性,而牺牲了一种效率较低的替代物,这可能会影响吩嗪从电子传递链 (ETC) 中提取电子的速度,从而产生活性氧物质。另一方面,SoxR 通过诱导几种外排泵和与氧化还原相关的基因的表达来响应吩嗪,包括三个超氧化物歧化酶拷贝中的一个和其调控组的五个新成员,这些成员无法通过计算预测。值得注意的是,在低浓度的吩嗪下,ActR 的缺失比 SoxR 的缺失更有害,并且还增加了对其他功能冗余的 SoxR 调节的超氧化物歧化酶的依赖。因此,我们的研究结果提出了一个有趣的可能性,即生物体 ETC 的组成可能是决定其对氧化还原活性化合物的敏感性或耐受性的驱动因素。