Department of Infectious Diseases, Medical Microbiology and Hygiene, Heidelberg University Hospital, 69120 Heidelberg, Germany.
Institute of Pharmacy and Biochemistry, Johannes Gutenberg-University Mainz, 55128 Mainz, Germany.
RNA. 2019 Jul;25(7):869-880. doi: 10.1261/rna.070243.118. Epub 2019 Apr 24.
Bacterial RNA has emerged as an important activator of innate immune responses by stimulating Toll-like receptors TLR7 and TLR8 in humans. Guanosine 2'--methylation at position 18 (Gm18) in bacterial tRNA was shown to antagonize tRNA-induced TLR7/8 activation, suggesting a potential role of Gm18 as an immune escape mechanism. This modification also occurs in eukaryotic tRNA, yet a physiological immune function remained to be tested. We therefore set out to investigate the immune modulatory role of Gm18 in both prokaryotic and eukaryotic microorganisms, and , and in human cells. Using RiboMethSeq analysis we show that mutation of in , in , and CRISPR/Cas9-induced knockout of in results in loss of Gm18 within tRNA. Lack of Gm18 across the kingdoms resulted in increased immunostimulation of peripheral blood mononuclear cells when activated by tRNA preparations. In , lack of 2'--methyltransferase trmH also enhanced immune stimulatory properties by whole cellular RNA. In contrast, lack of Gm18 in yeasts and human cells did not affect immunostimulation by whole RNA preparations. When using live bacteria, lack of did not affect overall immune stimulation although we detected a defined TLR8/RNA-dependent gene expression signature upon infection. Together, these results demonstrate that Gm18 is a global immune inhibitory tRNA modification across the kingdoms and contributes to tRNA recognition by innate immune cells, but as an individual modification has insufficient potency to modulate recognition of the investigated microorganisms.
细菌 RNA 通过刺激人类 TLR7 和 TLR8,已成为先天免疫反应的重要激活剂。研究表明,细菌 tRNA 中第 18 位的鸟苷 2'--甲基化(Gm18)拮抗 tRNA 诱导的 TLR7/8 激活,提示 Gm18 可能作为一种免疫逃避机制发挥作用。这种修饰也发生在真核 tRNA 中,但生理免疫功能仍有待检验。因此,我们着手研究 Gm18 在原核和真核微生物中的免疫调节作用,以及在人类细胞中的作用。使用 RiboMethSeq 分析,我们发现 缺失突变, 缺失突变,以及 CRISPR/Cas9 诱导的 缺失,导致 tRNA 中 Gm18 的缺失。跨生物界缺乏 Gm18 会导致 tRNA 激活时外周血单核细胞的免疫刺激增加。在 中,2'--甲基转移酶 trmH 的缺失也增强了整个细胞 RNA 的免疫刺激特性。相比之下,酵母和人类细胞中 Gm18 的缺失并不影响整个 RNA 制剂的免疫刺激。当使用活 细菌时,尽管我们在 感染时检测到了特定的 TLR8/RNA 依赖性基因表达特征,但 缺失并不影响整体免疫刺激。总之,这些结果表明,Gm18 是跨生物界的一种普遍的免疫抑制性 tRNA 修饰,有助于先天免疫细胞识别 tRNA,但作为一种单独的修饰,其不足以调节所研究微生物的识别。
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