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利用酵母化学基因组特征分析技术研究邻苯二甲酸二(2-乙基己基)酯的化学遗传互作图谱。

Chemical-genetic interaction landscape of mono-(2-ethylhexyl)-phthalate using chemogenomic profiling in yeast.

机构信息

Bioinformatics Institute, 30 Biopolis Street, #07-01, Matrix, Singapore 138671, Singapore.

Bioinformatics Institute, 30 Biopolis Street, #07-01, Matrix, Singapore 138671, Singapore.

出版信息

Chemosphere. 2019 Aug;228:219-231. doi: 10.1016/j.chemosphere.2019.04.100. Epub 2019 Apr 15.

Abstract

Integration of chemical-genetic interaction data with biological functions provides a mechanistic understanding of how toxic compounds affect cells. Mono-(2-ethylhexyl)-phthalate (MEHP) is an active metabolite of di-(2-ethylhexyl)-phthalate (DEHP), a commonly used plasticizer. MEHP adversely affects human health causing hepatotoxicity and reproductive toxicity. How MEHP affects cellular physiology is not fully understood. We utilized a genome-wide competitive fitness-based assay called 'chemogenomic profiling' to determine the genetic interaction map of MEHP in Saccharomyces cerevisiae. Gene Ontology enrichment analysis of 218 genes that provide resistance to MEHP indicated that MEHP affects seven cellular processes namely: (1) cellular amino acid biosynthetic process, (2) sterol biosynthetic process, (3) cellular transport, (4) transcriptional and translational regulation, (5) protein glycosylation, (6) cytokinesis and cell morphogenesis and (7) ionic homeostasis. We show that MEHP protects yeast cells from membrane perturbing agents such as amphotericin B, dihydrosphingosine and phytosphingosine. Moreover, we also demonstrate that MEHP compromises the integrity of the yeast plasma membrane and cell wall. Our work provides a basis for further investigation of MEHP toxicity in humans.

摘要

化学遗传相互作用数据与生物功能的整合提供了一种机制性的理解,即有毒化合物如何影响细胞。邻苯二甲酸二-(2-乙基己基)酯 (DEHP) 的一种活性代谢物单-(2-乙基己基)邻苯二甲酸酯 (MEHP),是一种常用的增塑剂。MEHP 对人类健康有害,会导致肝毒性和生殖毒性。目前还不完全清楚 MEHP 如何影响细胞生理学。我们利用一种称为“化学基因组 profiling”的全基因组竞争性适合度测定法,来确定 MEHP 在酿酒酵母中的遗传相互作用图谱。对 218 个提供 MEHP 抗性的基因进行基因本体论富集分析表明,MEHP 影响了七个细胞过程,分别是:(1) 细胞氨基酸生物合成过程,(2) 固醇生物合成过程,(3) 细胞运输,(4) 转录和翻译调控,(5) 蛋白质糖基化,(6) 胞分裂和细胞形态发生,以及 (7) 离子稳态。我们表明,MEHP 可保护酵母细胞免受膜扰动剂,如两性霉素 B、二氢神经鞘氨醇和植物鞘氨醇的影响。此外,我们还证明 MEHP 会损害酵母质膜和细胞壁的完整性。我们的工作为进一步研究 MEHP 对人类的毒性提供了基础。

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