Moseler Anna, Selles Benjamin, Rouhier Nicolas, Couturier Jérémy
Université de Lorraine, Inra, IAM, F-54000, Nancy, France.
New Phytol. 2020 May;226(4):967-977. doi: 10.1111/nph.15870. Epub 2019 May 23.
Sulfurtransferases (STRs) constitute a large and complex protein family characterized by the presence of a rhodanese domain and implicated in diverse molecular and signaling processes as sulfur carriers. Although sulfurtransferases are present in the three domains of life and share evolutionary relationships, a high variability exists at different levels including the protein length and active site sequence, the presence of an indispensable catalytic cysteine residue, the domain arrangement and the subcellular localization. Because only Arabidopsis thaliana sequences have been inventoried so far, this paper aims at providing a detailed classification and inventory of evolutionary features of this family in photosynthetic organisms using comparative genomics, focusing on the oak genome. Based on the expansion of STRs in higher photosynthetic organisms, we classified the STR family in nine clusters depending on their primary sequence and domain arrangement. We found that oak possesses at least one isoform in all defined clusters and that clusters IV, V and VI contain plant-specific isoforms that are located mostly in chloroplasts. The novel classification proposed here provides the basis for functional genomics approaches in order to dissect the biochemical characteristics and physiological functions of individual STR representatives.
硫转移酶(STRs)构成了一个庞大而复杂的蛋白质家族,其特征在于存在一个硫氧还蛋白结构域,并作为硫载体参与多种分子和信号传导过程。尽管硫转移酶存在于生命的三个域中并具有进化关系,但在不同水平上存在高度变异性,包括蛋白质长度和活性位点序列、必不可少的催化半胱氨酸残基的存在、结构域排列和亚细胞定位。由于迄今为止仅对拟南芥序列进行了编目,本文旨在利用比较基因组学,以橡树基因组为重点,详细分类和编目光合生物中该家族的进化特征。基于STRs在高等光合生物中的扩增,我们根据其一级序列和结构域排列将STR家族分为九个簇。我们发现橡树在所有定义的簇中至少拥有一种异构体,并且簇IV、V和VI包含主要位于叶绿体中的植物特异性异构体。本文提出的新分类为功能基因组学方法提供了基础,以便剖析各个STR代表的生化特性和生理功能。