School of Biological Sciences, University of East Anglia, Norwich Research Park, Norwich, NR4 7TJ, UK.
Earlham Institute, Norwich Research Park, Norwich, NR4 7UZ, UK.
Sci Rep. 2019 Apr 30;9(1):6704. doi: 10.1038/s41598-019-42610-2.
Evolutionary responses to nutrition are key to understanding host shifts and the resulting potential for reproductive isolation. Experimental evolution has previously been used to describe the responses of the medfly (Ceratitis capitata) to larval diets with different nutritional properties. Within 30 generations this led to divergence in larval development time, egg to adult survival and adaptation in adult body size. Here we used mRNA-seq to identify differences in gene expression patterns in these same populations, using males from the 60 generation of nutritional selection. We validated differential expression by using qRT-PCR and found that genes linked to metabolism, oxidative phosphorylation and proteolysis were significantly over-represented among the differentially expressed genes. The results provide the first genome-wide survey of the putative mechanisms underpinning evolved responses to nutritional adaptation. In addition, we tested the hypothesis that nutritional adaptation can alter mating patterns. We found evidence for assortative mating by diet at generation 60, but not 90. Hence, the pattern was variable across generations and there was no evidence overall for any isolating mating divergence between the lines. Overall, the results provide insight into the mechanisms underpinning dietary adaptation and extend our knowledge of which traits represent core responses to nutritional selection.
对营养的进化反应是理解宿主转移和由此产生的生殖隔离潜力的关键。实验进化以前被用来描述地中海实蝇(Ceratitis capitata)对具有不同营养特性的幼虫饮食的反应。在 30 代内,这导致幼虫发育时间、卵到成虫的存活率和成虫体型的适应性出现分歧。在这里,我们使用 mRNA-seq 来鉴定这些相同种群中基因表达模式的差异,使用来自营养选择的第 60 代的雄性。我们通过 qRT-PCR 验证了差异表达,发现与代谢、氧化磷酸化和蛋白水解相关的基因在差异表达基因中显著过表达。结果提供了对营养适应进化反应背后潜在机制的首次全基因组调查。此外,我们测试了营养适应可以改变交配模式的假设。我们在第 60 代发现了饮食交配的证据,但在第 90 代没有发现。因此,这种模式在几代之间是可变的,总体上没有证据表明这两条线之间存在任何隔离的交配分歧。总的来说,这些结果提供了对饮食适应基础机制的深入了解,并扩展了我们对哪些特征代表对营养选择的核心反应的认识。