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多基因检测可确定三阴性乳腺癌患者的复发风险。

A Multigene Assay Determines Risk of Recurrence in Patients with Triple-Negative Breast Cancer.

机构信息

Department of Pathology and Laboratory Medicine and the Markey Cancer Center, University of Kentucky College of Medicine, Lexington, Kentucky.

Department of Oncological Sciences, Huntsman Cancer Institute, University of Utah, Salt Lake City, Utah.

出版信息

Cancer Res. 2019 Jul 1;79(13):3466-3478. doi: 10.1158/0008-5472.CAN-18-3014. Epub 2019 May 2.

Abstract

Approximately 40% of patients with stage I-III triple-negative breast cancer (TNBC) recur after standard treatment, whereas the remaining 60% experience long-term disease-free survival (DFS). There are currently no clinical tests to assess the risk of recurrence in TNBC patients. We previously determined that TNBC patients with MHC class II (MHCII) pathway expression in their tumors experienced significantly longer DFS. To translate this discovery into a clinical test, we developed an MHCII Immune Activation assay, which measures expression of 36 genes using NanoString technology. Preanalytical testing confirmed that the assay is accurate and reproducible in formalin-fixed paraffin-embedded (FFPE) tumor specimens. The assay measurements were concordant with RNA-seq, MHCII protein expression, and tumor-infiltrating lymphocyte counts. In a training set of 44 primary TNBC tumors, the MHCII Immune Activation Score was significantly associated with longer DFS (HR = 0.17; = 0.015). In an independent validation cohort of 56 primary FFPE TNBC tumors, the Immune Activation Score was significantly associated with longer DFS (HR = 0.19; = 0.011) independent of clinical stage. An Immune Activation Score threshold for identifying patients with very low risk of relapse in the training set provided 100% specificity in the validation cohort. The assay format enables adoption as a standardized clinical prognostic test for identifying TNBC patients with a low risk of recurrence. Correlative data support future studies to determine if the assay can identify patients in whom chemotherapy can be safely deescalated and patients likely to respond to immunotherapy. SIGNIFICANCE: The MHCII Immune Activation assay identifies TNBC patients with a low risk of recurrence, addressing a critical need for prognostic biomarker tests that enable precision medicine for TNBC patients.

摘要

大约 40%的 I-III 期三阴性乳腺癌 (TNBC) 患者在标准治疗后复发,而其余 60%的患者则经历长期无病生存 (DFS)。目前没有临床检测方法可以评估 TNBC 患者的复发风险。我们之前确定,肿瘤中 MHC II(MHCII)途径表达的 TNBC 患者的 DFS 明显更长。为了将这一发现转化为临床检测,我们开发了一种 MHCII 免疫激活检测,该检测使用 NanoString 技术测量 36 个基因的表达。分析前测试证实,该检测在福尔马林固定石蜡包埋 (FFPE) 肿瘤标本中准确且可重复。该检测的测量结果与 RNA-seq、MHCII 蛋白表达和肿瘤浸润淋巴细胞计数一致。在 44 例原发性 TNBC 肿瘤的训练集中,MHCII 免疫激活评分与较长的 DFS 显著相关(HR=0.17;P=0.015)。在 56 例原发性 FFPE TNBC 肿瘤的独立验证队列中,免疫激活评分与较长的 DFS 显著相关(HR=0.19;P=0.011),与临床分期无关。在训练集中,确定复发风险极低的患者的免疫激活评分阈值在验证队列中提供了 100%的特异性。该检测方法的格式可作为一种标准化的临床预后检测方法,用于识别复发风险较低的 TNBC 患者。相关数据支持未来的研究,以确定该检测方法是否可以识别出化疗可以安全降级的患者以及可能对免疫治疗有反应的患者。意义:MHCII 免疫激活检测可识别复发风险较低的 TNBC 患者,满足了对能够为 TNBC 患者提供精准医疗的预后生物标志物检测的迫切需求。

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