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miRNA 表达谱分析揭示了 miR-302b-3p 在调控皮肤成纤维细胞衰老中的作用。

miRNA expression profiling uncovers a role of miR-302b-3p in regulating skin fibroblasts senescence.

机构信息

Key Laboratory of Longevity and Aging-Related Diseases, Ministry of Education, Guangxi Medical University, Nanning, China.

Department of Physiology, Guangxi Medical University, Nanning, China.

出版信息

J Cell Biochem. 2020 Jan;121(1):70-80. doi: 10.1002/jcb.28862. Epub 2019 May 9.

Abstract

Numbers of emerging evidence suggest that variable microRNA (miRNA) expression facilitates the aging process. In this study, we distinguished aberrant miRNA expression in aged skin and explored the biological functions and potential mechanism of upregulated miR-302b-3p. At first, miRNA microarray analysis was examined to explore miRNA expression profiling in the skin of aging mice model by D-galactose (d-gal) injection. We identified 29 aberrant miRNAs in aged mice skin. Next, KEGG enrichment analysis was conducted with DIANA-miPath v3.0, which was revealed that enrichment pathways involved in such processes as extracellular matrix-receptor interaction, MAPK signaling pathway, and mammalian target of rapamycin (mTOR) signaling pathway. The target genes of deregulated miRNAs were predicted from four bioinformatic algorithms (miRDB, Targetscan, miRwalk, and Tarbase). The interaction network of miRNAs and their targets were visualized using Cytoscape software. As a result, we found that some hub genes (including JNK2, AKT1/2/3, PAK7, TRPS1, BCL2L11, and IKZF2) were targeted by 12 potential miRNAs (including miR-302b-3p, miR-291a-5p, miR-139-3p, miR-467c-3p, miR-186-3p, etc.). Subsequently, we identified five upregulated miRNA via quantitative polymerase chain reaction and all of them were confirmed increased significantly in aged skin tissues compared with young control tissues. Among them, high expression of miR-302b-3p was verified in both aged skin tissues and senescence fibroblasts. Furthermore, miR-302b-3p mimic accelerated skin fibroblast senescence and suppressed the longevity-associated gene Sirtuin 1(Sirt1) expression, whereas miR-302b-3p inhibitor could delay skin fibroblast senescence and contribute Sirt1 expression. In addition, we demonstrated that c-Jun N-terminal kinase 2(JNK2) is a direct target of miR-302b-3p by a luciferase reporter assay. An inverse correlation was verified in fibroblasts between miR-302b-3p and JNK2. Most importantly, siRNA JNK2 confirmed that low expression of JNK2 could accelerate fibroblasts senescence. In conclusion, our results indicated that overexpressed miR-302b-3p plays an important biological role in accelerating skin aging process via directly targeting JNK2 gene.

摘要

越来越多的证据表明,可变 microRNA(miRNA)表达促进了衰老过程。在这项研究中,我们区分了衰老皮肤中的异常 miRNA 表达,并探索了上调的 miR-302b-3p 的生物学功能和潜在机制。首先,通过 D-半乳糖(d-gal)注射对衰老小鼠模型的皮肤进行 miRNA 微阵列分析,以探索 miRNA 表达谱。我们在衰老小鼠的皮肤中发现了 29 个异常 miRNA。接下来,使用 DIANA-miPath v3.0 进行 KEGG 富集分析,结果表明富集途径涉及细胞外基质-受体相互作用、MAPK 信号通路和哺乳动物雷帕霉素靶蛋白(mTOR)信号通路等过程。从四个生物信息学算法(miRDB、Targetscan、miRwalk 和 Tarbase)预测了失调 miRNA 的靶基因。使用 Cytoscape 软件可视化 miRNA 及其靶基因的相互作用网络。结果发现,一些枢纽基因(包括 JNK2、AKT1/2/3、PAK7、TRPS1、BCL2L11 和 IKZF2)被 12 个潜在 miRNA(包括 miR-302b-3p、miR-291a-5p、miR-139-3p、miR-467c-3p、miR-186-3p 等)靶向。随后,我们通过定量聚合酶链反应鉴定了五个上调的 miRNA,所有 miRNA 在衰老皮肤组织中的表达均明显高于年轻对照组织。其中,miR-302b-3p 在衰老皮肤组织和衰老成纤维细胞中均有高表达。此外,miR-302b-3p 模拟物加速了皮肤成纤维细胞衰老并抑制了长寿相关基因 Sirtuin 1(Sirt1)的表达,而 miR-302b-3p 抑制剂则可延缓皮肤成纤维细胞衰老并促进 Sirt1 的表达。此外,我们通过荧光素酶报告实验证明 c-Jun N-末端激酶 2(JNK2)是 miR-302b-3p 的直接靶标。在成纤维细胞中证实了 miR-302b-3p 与 JNK2 之间存在负相关。最重要的是,siRNA JNK2 证实低表达 JNK2 可以加速成纤维细胞衰老。总之,我们的结果表明,过表达的 miR-302b-3p 通过直接靶向 JNK2 基因在加速皮肤衰老过程中发挥重要的生物学作用。

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