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强化微生物监测表明,时间病例群落在模型农业生态系统中高发病率的弯曲杆菌病中起作用。

Enhanced microbiological surveillance reveals that temporal case clusters contribute to the high rates of campylobacteriosis in a model agroecosystem.

机构信息

Lethbridge Research and Development Centre, Agriculture and Agri-Food Canada, Lethbridge, AB, Canada.

Department of Laboratory Medicine, Chinook Regional Hospital, Lethbridge, AB, Canada.

出版信息

Int J Med Microbiol. 2019 May-Jun;309(3-4):232-244. doi: 10.1016/j.ijmm.2019.04.003. Epub 2019 Apr 28.

Abstract

Infections by pathogenic Campylobacter species were determined in diarrheic (n = 2,217) and non-diarrheic control (n = 104) people in Southwestern Alberta (SWA), Canada over a 1-year period using specialized and conventional isolation, and direct PCR. Overall, 9.9% of diarrheic individuals were positive for C. jejuni (9.1%), C. upsaliensis (0.6%), and C. coli (0.5%). No C. lari was detected. Four diarrheic individuals were co-infected with C. jejuni and C. coli, and four different individuals were co-infected with C. jejuni and C. upsaliensis. Two control individuals were positive for C. jejuni. Approximately 50% of stools containing C. jejuni and/or C. coli were deemed negative by conventional isolation. Direct PCR for C. jejuni was less effective than culture-based detection. Most C. jejuni infections occurred in people living in the urban centers, but the prevalence of the bacterium was lower in females than males living in urban locations, and both males and females living in rural locations. Although C. jejuni was detected throughout the year, a trend for higher infection rates was observed in the late spring to early fall with a peak in August. Forty-six C. jejuni subtype clusters were identified, including 44 temporal case clusters attributed to 28 subtype groupings. The majority of infections (70.3%) were linked to subtypes associated with beef cattle. We conclude that many occurrences of pathogenic Campylobacter species were not detected by the conventional laboratory methodology, and temporal case clusters of C. jejuni subtypes associated with cattle contribute to the high rates of campylobacteriosis in SWA.

摘要

在加拿大阿尔伯塔省西南部(SWA),在为期 1 年的时间里,使用专门的和常规的分离和直接 PCR 方法,确定了腹泻(n=2217)和非腹泻对照(n=104)人群中致病性弯曲杆菌种的感染情况。总体而言,9.9%的腹泻患者 C. jejuni(9.1%)、C. upsaliensis(0.6%)和 C. coli(0.5%)呈阳性。未检测到 C. lari。4 例腹泻患者同时感染 C. jejuni 和 C. coli,4 例不同患者同时感染 C. jejuni 和 C. upsaliensis。2 例对照患者 C. jejuni 呈阳性。大约 50%含有 C. jejuni 和/或 C. coli 的粪便经常规分离法判定为阴性。直接 PCR 检测 C. jejuni 的效果不如基于培养的检测。大多数 C. jejuni 感染发生在居住在城市中心的人群中,但居住在城市地区的女性中该细菌的流行率低于男性,居住在农村地区的男性和女性中也是如此。虽然 C. jejuni 全年都有检测到,但在春末到初秋期间观察到感染率上升的趋势,8 月达到高峰。鉴定出 46 个 C. jejuni 亚型聚类,包括归因于 28 个亚型组的 44 个时间病例聚类。大多数感染(70.3%)与与肉牛相关的 C. jejuni 亚型有关。我们得出结论,许多致病性弯曲杆菌种的发生未通过常规实验室方法检测到,与牛相关的 C. jejuni 亚型的时间病例聚类导致 SWA 中弯曲杆菌病的高发病率。

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