Shang Xiaoran, Nelson Daniel C
Institute for Bioscience and Biotechnology Research, Rockville, MD 20850, USA.
Department of Veterinary Medicine, University of Maryland, College Park, MD 20742, USA.
Antibiotics (Basel). 2019 May 28;8(2):70. doi: 10.3390/antibiotics8020070.
Bacteriophage endolysins, enzymes that degrade the bacterial peptidoglycan (PG), have gained an increasing interest as alternative antimicrobial agents, due to their ability to kill antibiotic resistant pathogens efficiently when applied externally as purified proteins. Typical endolysins derived from bacteriophage that infect Gram-positive hosts consist of an N-terminal enzymatically-active domain (EAD) that cleaves covalent bonds in the PG, and a C-terminal cell-binding domain (CBD) that recognizes specific ligands on the surface of the PG. Although CBDs are usually essential for the EADs to access the PG substrate, some EADs possess activity in the absence of CBDs, and a few even display better activity profiles or an extended host spectrum than the full-length endolysin. A current hypothesis suggests a net positive charge on the EAD enables it to reach the negatively charged bacterial surface via ionic interactions in the absence of a CBD. Here, we used the PlyC CHAP domain as a model EAD to further test the hypothesis. We mutated negatively charged surface amino acids of the CHAP domain that are not involved in structured regions to neutral or positively charged amino acids in order to increase the net charge from -3 to a range from +1 to +7. The seven mutant candidates were successfully expressed and purified as soluble proteins. Contrary to the current hypothesis, none of the mutants were more active than wild-type CHAP. Analysis of electrostatic surface potential implies that the surface charge distribution may affect the activity of a positively charged EAD. Thus, we suggest that while charge should continue to be considered for future engineering efforts, it should not be the sole focus of such engineering efforts.
噬菌体溶菌酶是一种能够降解细菌肽聚糖(PG)的酶,由于其作为纯化蛋白外用时能有效杀死抗生素耐药病原体的能力,作为替代抗菌剂受到了越来越多的关注。源自感染革兰氏阳性宿主的噬菌体的典型溶菌酶由一个N端酶活性结构域(EAD)和一个C端细胞结合结构域(CBD)组成,EAD可切割PG中的共价键,CBD可识别PG表面的特定配体。尽管CBD通常对于EAD接近PG底物至关重要,但一些EAD在没有CBD的情况下也具有活性,少数EAD甚至比全长溶菌酶表现出更好的活性特征或更广泛的宿主谱。目前的一种假说认为,EAD上的净正电荷使其能够在没有CBD的情况下通过离子相互作用到达带负电荷的细菌表面。在这里,我们使用PlyC CHAP结构域作为模型EAD来进一步验证这一假说。我们将CHAP结构域中不参与结构化区域的带负电荷的表面氨基酸突变为中性或带正电荷的氨基酸,以使净电荷从-3增加到+1至+7的范围。这七个突变候选物均成功表达并纯化为可溶性蛋白。与当前假说相反,没有一个突变体比野生型CHAP更具活性。静电表面电位分析表明,表面电荷分布可能会影响带正电荷的EAD的活性。因此,我们建议,虽然在未来的工程设计中应继续考虑电荷因素,但它不应是此类工程设计的唯一重点。