Institute of Chemical Biology and Fundamental Medicine, Siberian Branch of Russian Academy of Sciences, Novosibirsk, Russia; Novosibirsk National Research State University, Novosibirsk, Russia.
Institute of Chemical Biology and Fundamental Medicine, Siberian Branch of Russian Academy of Sciences, Novosibirsk, Russia.
Clin Chim Acta. 2019 Aug;495:529-537. doi: 10.1016/j.cca.2019.05.028. Epub 2019 May 30.
Since tears are a biological fluid, they have a potential diagnostic value for ophthalmic diseases. The aim of this study was to compare tear supernatants and pellets obtained from patients suffering from primary open angle glaucoma (POAG) and healthy persons (HPs) using transmission electron microscopy (TEM) and molecular biological methods. Tear supernatants and pellets were prepared using ultrafiltration and ultracentrifugation and were examined by negative staining and immunogold labelling TEM. DNA of the pellets was isolated, quantified and sequenced using a MiSeq (Illumina, USA) genomic sequencer with the Reagent Kit v3 (600 cycles, Illumina, USA). MicroRNA was isolated and quantified from the pellets; miR-146b, miR-16 and miR-126 were detected using TaqMan MicroRNA Assays (Applied Biosystems, USA). TEM of tear supernatants from both POAG patients and HPs revealed identical constituents: spherical or cup-shaped vesicles, "non-vesicles", cell debris and macromolecular aggregates. Pellets of POAG patients and HPs contained small extracellular vesicles (sEVs) non-labelled vesicles and "non-vesicles"; pellets of sick persons also contained sEVs with "a capsule". POAG-patient tear pellets showed elevated concentrations of genomic ds-DNA and SINE-repeats, and different expressions of miR-146b, miR-16 and miR-126 and a different set of bacterial DNA in comparison with pellets obtained from the tears of HPs. The data obtained indicate that the tears of HPs and POAG patients could serve as an object for TEM studies and as a source of sEV-containing preparations (pellets), which, in turn, could be used for the isolation and study of genomic ds-DNA and RNA. Our data provide the basis for using tears for diagnostic applications.
由于眼泪是一种生物液体,因此它们对眼科疾病具有潜在的诊断价值。本研究的目的是使用透射电子显微镜(TEM)和分子生物学方法比较原发性开角型青光眼(POAG)患者和健康人(HPs)的泪液上清液和沉淀物。使用超滤和超速离心法制备泪液上清液和沉淀物,并通过负染色和免疫胶体金标记 TEM 进行检查。使用 MiSeq(Illumina,美国)基因组测序仪和 Reagent Kit v3(600 个循环,Illumina,美国)从沉淀物中分离、定量和测序 DNA。从沉淀物中分离和定量 microRNA;使用 TaqMan MicroRNA 测定法(Applied Biosystems,美国)检测 miR-146b、miR-16 和 miR-126。POAG 患者和 HPs 的泪液上清液的 TEM 显示出相同的成分:球形或杯形囊泡、“非囊泡”、细胞碎片和大分子聚集体。POAG 患者和 HPs 的沉淀物含有小细胞外囊泡(sEVs)、非标记囊泡和“非囊泡”;患病者的沉淀物还含有带有“胶囊”的 sEVs。与从 HPs 的泪液中获得的沉淀物相比,POAG 患者的泪液沉淀物显示出基因组 ds-DNA 和 SINE 重复物的浓度升高,以及 miR-146b、miR-16 和 miR-126 的不同表达以及一组不同的细菌 DNA。与从 HPs 的泪液中获得的沉淀物相比,POAG 患者的泪液沉淀物显示出基因组 ds-DNA 和 SINE 重复物的浓度升高,以及 miR-146b、miR-16 和 miR-126 的不同表达以及一组不同的细菌 DNA。获得的数据表明,HPs 和 POAG 患者的眼泪可以作为 TEM 研究的对象,也可以作为包含 sEV 的制剂(沉淀物)的来源,这些制剂反过来又可以用于分离和研究基因组 ds-DNA 和 RNA。我们的数据为使用眼泪进行诊断应用提供了依据。