a Laboratory of Drug Design and Discovery, Department of Pharmaceutical Sciences , Dr. Harisingh Gour University , Madhya Pradesh , India.
b Natural Science Laboratory, Department of Pharmaceutical Technology, Division of Medicinal & Pharmaceutical Chemistry , Jadavpur University , Kolkata , India.
SAR QSAR Environ Res. 2019 Jul;30(7):457-475. doi: 10.1080/1062936X.2019.1615545. Epub 2019 Jun 3.
ABCG2 is the principal ABC transporter involved in the multidrug resistance of breast cancer. Looking at the current demand in the development of ABCG2 inhibitors for the treatment of multidrug-resistant cancer, we have explored structural requirements of phenyltetrazole derivatives for ABCG2 inhibition by combining classical QSAR, Bayesian classification modelling and molecular docking studies. For classical QSAR, structural descriptors were calculated from the free software tool PaDEL-descriptor. Stepwise multiple linear regression (SMLR) was used for model generation. A statistically significant model was generated and validated with different parameters (For training set: = 0.825; = 0.570 and for test set: = 0.894, r = 0.783). The predicted model was found to satisfy the Golbraikh and Trospha criteria for model acceptability. Bayesian classification modelling was also performed (ROC scores were 0.722 and 0.767 for the training and test sets, respectively). Finally, the binding interactions of phenyltetrazole type inhibitor with the ABCG2 receptor were mapped with the help of molecular docking study. The result of the docking analysis is aligned with the classical QSAR and Bayesian classification studies. The combined modelling study will guide the medicinal chemists to act faster in the drug discovery of ABCG2 inhibitors for the management of resistant breast cancer.
ABCG2 是参与乳腺癌多药耐药的主要 ABC 转运蛋白。鉴于目前对开发 ABCG2 抑制剂治疗多药耐药癌症的需求,我们通过结合经典 QSAR、贝叶斯分类建模和分子对接研究,探讨了苯并四唑衍生物对 ABCG2 抑制的结构要求。对于经典 QSAR,结构描述符是从免费软件工具 PaDEL-descriptor 中计算出来的。逐步多元线性回归 (SMLR) 用于模型生成。使用不同的参数生成了一个具有统计学意义的模型,并对其进行了验证(对于训练集: = 0.825; = 0.570,对于测试集: = 0.894,r = 0.783)。预测模型被发现满足模型可接受性的 Golbraikh 和 Trospha 标准。还进行了贝叶斯分类建模(训练集和测试集的 ROC 评分分别为 0.722 和 0.767)。最后,借助分子对接研究,绘制了苯并四唑类抑制剂与 ABCG2 受体的结合相互作用图。对接分析的结果与经典 QSAR 和贝叶斯分类研究一致。联合建模研究将指导药物化学家在发现 ABCG2 抑制剂以管理耐药性乳腺癌方面更快地开展药物研发工作。