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全面的免疫受体谱研究在肺结核患者中的应用。

A comprehensive immune repertoire study for patients with pulmonary tuberculosis.

机构信息

Department of Respiratory and Critical Care Medicine, The Second Medical College of Jinan University (Shenzhen People's Hospital), Shenzhen, China.

Shenzhen Key Laboratory of Respiratory Disease, Shenzhen, China.

出版信息

Mol Genet Genomic Med. 2019 Jul;7(7):e00792. doi: 10.1002/mgg3.792. Epub 2019 Jun 7.

DOI:10.1002/mgg3.792
PMID:31173489
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6625341/
Abstract

BACKGROUND

Tuberculosis (TB) is a major global health problem and has replaced HIV as the leading cause of death from a single infectious agent.

METHODS

Here, we applied high throughput sequencing to study the immune repertoire of nine pulmonary tuberculosis patients and nine healthy control samples.

RESULTS

Tuberculosis patients and healthy controls displayed significantly different high express clones and distinguishable sharing of CDR3 sequences. The TRBV and TRBJ gene usage showed higher expression clones in patients than in controls and we also found specific high express TRBV and TRBJ gene clones in different groups. In addition, six highly expressed TRBV/TRBJ combinations were detected in the CD4 group, 21 in the CD8 group and 32 in the tissue group.

CONCLUSION

In conclusion, we studied the patients with tuberculosis as well as healthy control individuals in order to understand the characteristics of immune repertoire. Sharing of CDR3 sequences and differential expression of genes was found among the patients with tuberculosis which could be used for the development of potential vaccine and targets treatment.

摘要

背景

结核病(TB)是一个全球性的主要健康问题,已取代艾滋病毒成为单一传染病原体导致死亡的主要原因。

方法

在这里,我们应用高通量测序来研究九例肺结核患者和九例健康对照样本的免疫受体库。

结果

肺结核患者和健康对照组显示出明显不同的高表达克隆和可区分的 CDR3 序列共享。TRBV 和 TRBJ 基因的使用显示患者组的高表达克隆高于对照组,我们还发现了不同组中特定的高表达 TRBV 和 TRBJ 基因克隆。此外,在 CD4 组中检测到六个高表达的 TRBV/TRBJ 组合,在 CD8 组中检测到 21 个,在组织组中检测到 32 个。

结论

总之,我们研究了肺结核患者和健康对照个体,以了解免疫受体库的特征。在肺结核患者中发现了 CDR3 序列的共享和基因的差异表达,这可能用于开发潜在的疫苗和治疗靶点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9ed6/6625341/41d0b51b98d6/MGG3-7-e00792-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9ed6/6625341/a9e054bfad54/MGG3-7-e00792-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9ed6/6625341/6aa7b398b059/MGG3-7-e00792-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9ed6/6625341/90318716fc65/MGG3-7-e00792-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9ed6/6625341/41d0b51b98d6/MGG3-7-e00792-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9ed6/6625341/a9e054bfad54/MGG3-7-e00792-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9ed6/6625341/6aa7b398b059/MGG3-7-e00792-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9ed6/6625341/90318716fc65/MGG3-7-e00792-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9ed6/6625341/41d0b51b98d6/MGG3-7-e00792-g006.jpg

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本文引用的文献

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2
Comprehensive assessment of peripheral blood TCRβ repertoire in infectious mononucleosis and chronic active EBV infection patients.传染性单核细胞增多症和慢性活动性EB病毒感染患者外周血TCRβ库的综合评估
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Islet-associated T-cell receptor-β CDR sequence repertoire in prediabetic NOD mice reveals antigen-driven T-cell expansion and shared usage of VβJβ TCR chains.
通过 γ 逆转录病毒载体甲基化抑制过继细胞转移治疗中转基因 T 细胞受体表达的表观遗传调控
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在糖尿病前期 NOD 小鼠中胰岛相关 T 细胞受体-β CDR 序列库揭示了抗原驱动的 T 细胞扩增和共用 VβJβ TCR 链的使用。
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The γδ T-cell receptor repertoire is reconstituted in HIV patients after prolonged antiretroviral therapy.γδ T 细胞受体谱在接受长期抗逆转录病毒治疗后在 HIV 患者中得到重建。
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