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黄热病病毒感染白纹伊蚊细胞反应的转录组分析。

Transcriptome analysis of responses to bluetongue virus infection in Aedes albopictus cells.

机构信息

State Key Laboratory of Veterinary Etiological Biology, Lanzhou Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Xujiaping 1, Lanzhou, Gansu, 730046, People's Republic of China.

Jiangsu Co-innovation Center for Prevention and Control of Important Animal Infectious Diseases and Zoonoses, Yangzhou University, Yangzhou, 225009, People's Republic of China.

出版信息

BMC Microbiol. 2019 Jun 10;19(1):121. doi: 10.1186/s12866-019-1498-3.

Abstract

BACKGROUND

Bluetongue virus (BTV) causes a disease among wild and domesticated ruminants which is not contagious, but which is transmitted by biting midges of the Culicoides species. BTV can induce an intense cytopathic effect (CPE) in mammalian cells after infection, although Culicoides- or mosquito-derived cell cultures cause non-lytic infection with BTV without CPE. However, little is known about the transcriptome changes in Aedes albopictus cells infected with BTV.

METHODS

Transcriptome sequencing was used to identify the expression pattern of mRNA transcripts in A. albopictus cells infected with BTV, given the absence of the Culicoides genome sequence. Bioinformatics analyses were performed to examine the biological functions of the differentially expressed genes. Subsequently, quantitative reverse transcription-polymerase chain reaction was utilized to validate the sequencing data.

RESULTS

In total, 51,850,205 raw reads were generated from the BTV infection group and 51,852,293 from the control group. A total of 5769 unigenes were common to both groups; only 779 unigenes existed exclusively in the infection group and 607 in the control group. In total, 380 differentially expressed genes were identified, 362 of which were up-regulated and 18 of which were down-regulated. Bioinformatics analyses revealed that the differentially expressed genes mainly participated in endocytosis, FoxO, MAPK, dorso-ventral axis formation, insulin resistance, Hippo, and JAK-STAT signaling pathways.

CONCLUSION

This study represents the first attempt to investigate transcriptome-wide dysregulation in A. albopictus cells infected with BTV. The understanding of BTV pathogenesis and virus-vector interaction will be improved by global transcriptome profiling.

摘要

背景

蓝舌病毒(BTV)引起野生动物和家养反刍动物的疾病,这种疾病不具有传染性,但通过叮咬库蠓属的蠓传播。BTV 感染后可在哺乳动物细胞中引起强烈的细胞病变效应(CPE),尽管库蠓或蚊子来源的细胞培养物引起无 CPE 的 BTV 非裂解感染。然而,对于感染 BTV 的白纹伊蚊细胞的转录组变化知之甚少。

方法

由于缺乏库蠓基因组序列,我们使用转录组测序来鉴定 BTV 感染白纹伊蚊细胞中 mRNA 转录物的表达模式。生物信息学分析用于检查差异表达基因的生物学功能。随后,利用定量逆转录聚合酶链反应验证测序数据。

结果

从 BTV 感染组和对照组分别产生了 51850205 个和 51852293 个原始读数。两组共有 5769 个基因是共同的;仅在感染组中存在 779 个基因,而在对照组中存在 607 个基因。共鉴定出 380 个差异表达基因,其中 362 个上调,18 个下调。生物信息学分析表明,差异表达基因主要参与内吞作用、FoxO、MAPK、背腹轴形成、胰岛素抵抗、Hippo 和 JAK-STAT 信号通路。

结论

本研究首次尝试研究感染 BTV 的白纹伊蚊细胞的全转录组失调。通过对全转录组进行分析,将提高对 BTV 发病机制和病毒-载体相互作用的认识。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/48fe/6558886/0706b892d736/12866_2019_1498_Fig1_HTML.jpg

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