• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

绵羊胚胎睾丸细胞感染蓝舌病病毒的全转录组分析。

Whole-transcriptome analyses of sheep embryonic testicular cells infected with the bluetongue virus.

机构信息

School of Medicine, Kunming University, Kunming, Yunnan, China.

School of Medicine and Pharmacy, Ocean University of China, Qingdao, Shandong, China.

出版信息

Front Immunol. 2022 Dec 1;13:1053059. doi: 10.3389/fimmu.2022.1053059. eCollection 2022.

DOI:10.3389/fimmu.2022.1053059
PMID:36532076
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9751015/
Abstract

INTRODUCTION

bluetongue virus (BTV) infection triggers dramatic and complex changes in the host's transcriptional profile to favor its own survival and reproduction. However, there is no whole-transcriptome study of susceptible animal cells with BTV infection, which impedes the in-depth and systematical understanding of the comprehensive characterization of BTV-host interactome, as well as BTV infection and pathogenic mechanisms.

METHODS

to systematically understand these changes, we performed whole-transcriptome sequencing in BTV serotype 1 (BTV-1)-infected and mock-infected sheep embryonic testicular cells, and subsequently conducted bioinformatics differential analyses.

RESULTS

there were 1504 differentially expressed mRNAs, 78 differentially expressed microRNAs, 872 differentially expressed long non-coding RNAs, and 59 differentially expressed circular RNAs identified in total. Annotation from the Gene Ontology, enrichment from the Kyoto Encyclopedia of Genes and Genomes, and construction of competing endogenous RNA networks revealed differentially expressed RNAs primarily related to virus-sensing and signaling transduction pathways, antiviral and immune responses, inflammation, and development and metabolism related pathways. Furthermore, a protein-protein interaction network analysis found that BTV may contribute to abnormal spermatogenesis by reducing steroid biosynthesis. Finally, real-time quantitative PCR and western blotting results showed that the expression trends of differentially expressed RNAs were consistent with the whole-transcriptome sequencing data.

DISCUSSION

this study provides more insights of comprehensive characterization of BTV-host interactome, and BTV infection and pathogenic mechanisms.

摘要

简介

蓝舌病毒(BTV)感染会引发宿主转录谱的剧烈和复杂变化,以利于自身的存活和繁殖。然而,目前还没有对易感动物细胞进行 BTV 感染的全转录组研究,这阻碍了对 BTV-宿主互作组的全面特征、BTV 感染和致病机制的深入和系统理解。

方法

为了系统地了解这些变化,我们对 BTV 血清型 1(BTV-1)感染和模拟感染的绵羊胚胎睾丸细胞进行了全转录组测序,随后进行了生物信息学差异分析。

结果

总共鉴定出 1504 个差异表达的 mRNA、78 个差异表达的 microRNA、872 个差异表达的长非编码 RNA 和 59 个差异表达的环状 RNA。基因本体论注释、京都基因与基因组百科全书富集以及竞争性内源 RNA 网络构建表明,差异表达的 RNA 主要与病毒感应和信号转导途径、抗病毒和免疫反应、炎症以及发育和代谢相关途径相关。此外,蛋白质-蛋白质相互作用网络分析发现,BTV 可能通过减少类固醇生物合成导致精子发生异常。最后,实时定量 PCR 和 Western blot 结果表明,差异表达 RNA 的表达趋势与全转录组测序数据一致。

讨论

本研究为 BTV-宿主互作组的全面特征、BTV 感染和致病机制提供了更深入的见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/89e5/9751015/3337ca71fd20/fimmu-13-1053059-g011.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/89e5/9751015/63f1cc430aa2/fimmu-13-1053059-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/89e5/9751015/f3c828a64147/fimmu-13-1053059-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/89e5/9751015/265577d70e64/fimmu-13-1053059-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/89e5/9751015/a771a302ef00/fimmu-13-1053059-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/89e5/9751015/7d0dd770bf33/fimmu-13-1053059-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/89e5/9751015/f47d23eb1470/fimmu-13-1053059-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/89e5/9751015/2b9a9fd110f7/fimmu-13-1053059-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/89e5/9751015/f71dfee19ebf/fimmu-13-1053059-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/89e5/9751015/45631b31d3df/fimmu-13-1053059-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/89e5/9751015/443393efc986/fimmu-13-1053059-g010.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/89e5/9751015/3337ca71fd20/fimmu-13-1053059-g011.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/89e5/9751015/63f1cc430aa2/fimmu-13-1053059-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/89e5/9751015/f3c828a64147/fimmu-13-1053059-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/89e5/9751015/265577d70e64/fimmu-13-1053059-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/89e5/9751015/a771a302ef00/fimmu-13-1053059-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/89e5/9751015/7d0dd770bf33/fimmu-13-1053059-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/89e5/9751015/f47d23eb1470/fimmu-13-1053059-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/89e5/9751015/2b9a9fd110f7/fimmu-13-1053059-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/89e5/9751015/f71dfee19ebf/fimmu-13-1053059-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/89e5/9751015/45631b31d3df/fimmu-13-1053059-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/89e5/9751015/443393efc986/fimmu-13-1053059-g010.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/89e5/9751015/3337ca71fd20/fimmu-13-1053059-g011.jpg

相似文献

1
Whole-transcriptome analyses of sheep embryonic testicular cells infected with the bluetongue virus.绵羊胚胎睾丸细胞感染蓝舌病病毒的全转录组分析。
Front Immunol. 2022 Dec 1;13:1053059. doi: 10.3389/fimmu.2022.1053059. eCollection 2022.
2
Whole-transcriptome analyses of ovine lung microvascular endothelial cells infected with bluetongue virus.绵羊肺微血管内皮细胞感染蓝舌病病毒的全转录组分析。
Vet Res. 2024 Sep 27;55(1):122. doi: 10.1186/s13567-024-01372-0.
3
MicroRNA expression profiling of primary sheep testicular cells in response to bluetongue virus infection.原发性绵羊睾丸细胞对蓝舌病毒感染反应的微小RNA表达谱分析
Infect Genet Evol. 2017 Apr;49:256-267. doi: 10.1016/j.meegid.2017.01.029. Epub 2017 Jan 27.
4
Proteomic analysis of sheep primary testicular cells infected with bluetongue virus.感染蓝舌病毒的绵羊原代睾丸细胞的蛋白质组学分析
Proteomics. 2016 May;16(10):1499-514. doi: 10.1002/pmic.201500275. Epub 2016 Apr 13.
5
Testicular Degeneration and Infertility following Arbovirus Infection.感染虫媒病毒后睾丸退化和不育。
J Virol. 2018 Sep 12;92(19). doi: 10.1128/JVI.01131-18. Print 2018 Oct 1.
6
Transcriptome analysis of responses to bluetongue virus infection in Aedes albopictus cells.黄热病病毒感染白纹伊蚊细胞反应的转录组分析。
BMC Microbiol. 2019 Jun 10;19(1):121. doi: 10.1186/s12866-019-1498-3.
7
Bluetongue Virus NS4 Protein Is an Interferon Antagonist and a Determinant of Virus Virulence.蓝舌病毒NS4蛋白是一种干扰素拮抗剂和病毒毒力的决定因素。
J Virol. 2016 May 12;90(11):5427-39. doi: 10.1128/JVI.00422-16. Print 2016 Jun 1.
8
Transcriptome analysis reveals common differential and global gene expression profiles in bluetongue virus serotype 16 (BTV-16) infected peripheral blood mononuclear cells (PBMCs) in sheep and goats.转录组分析揭示了绵羊和山羊感染蓝舌病毒16型(BTV-16)的外周血单核细胞(PBMC)中常见的差异基因表达谱和整体基因表达谱。
Genom Data. 2016 Dec 9;11:62-72. doi: 10.1016/j.gdata.2016.12.001. eCollection 2017 Mar.
9
Pathological and immunological characterization of bluetongue virus serotype 1 infection in type I interferons blocked immunocompetent adult mice.Ⅰ型干扰素阻断免疫功能健全成年小鼠感染蓝舌病病毒血清型 1 的病理和免疫特征。
J Adv Res. 2021 Jan 20;31:137-153. doi: 10.1016/j.jare.2021.01.007. eCollection 2021 Jul.
10
Global gene expression analysis in skin biopsies of European red deer experimentally infected with bluetongue virus serotypes 1 and 8.欧洲赤鹿经口感染蓝舌病病毒血清型 1 型和 8 型后的皮肤活检组织的全基因表达分析。
Vet Microbiol. 2012 Dec 28;161(1-2):26-35. doi: 10.1016/j.vetmic.2012.07.003. Epub 2012 Jul 10.

引用本文的文献

1
Whole-transcriptome analyses of ovine lung microvascular endothelial cells infected with bluetongue virus.绵羊肺微血管内皮细胞感染蓝舌病病毒的全转录组分析。
Vet Res. 2024 Sep 27;55(1):122. doi: 10.1186/s13567-024-01372-0.
2
MicroRNAs: exploring their role in farm animal disease and mycotoxin challenges.微小RNA:探索它们在农场动物疾病和霉菌毒素挑战中的作用。
Front Vet Sci. 2024 May 13;11:1372961. doi: 10.3389/fvets.2024.1372961. eCollection 2024.

本文引用的文献

1
ggalluvial: Layered Grammar for Alluvial Plots.ggalluvial:用于冲积图的分层语法。
J Open Source Softw. 2020;5(49). doi: 10.21105/joss.02017. Epub 2020 May 21.
2
TRIM18 is a critical regulator of viral myocarditis and organ inflammation.TRIM18 是病毒性心肌炎和器官炎症的关键调节因子。
J Biomed Sci. 2022 Jul 31;29(1):55. doi: 10.1186/s12929-022-00840-z.
3
Deep Small RNA Sequencing Reveals Important miRNAs Related to Muscle Development and Intramuscular Fat Deposition in Muscle From Different Goat Breeds.深度小RNA测序揭示了与不同山羊品种肌肉发育和肌内脂肪沉积相关的重要微小RNA
Front Vet Sci. 2022 Jun 13;9:911166. doi: 10.3389/fvets.2022.911166. eCollection 2022.
4
Inflammatory cytokine storms severity may be fueled by interactions of micronuclei and RNA viruses such as COVID-19 virus SARS-CoV-2. A hypothesis.炎症细胞因子风暴的严重程度可能是由微核与 RNA 病毒(如 COVID-19 病毒 SARS-CoV-2)的相互作用所驱动的。一种假说。
Mutat Res Rev Mutat Res. 2021 Jul-Dec;788:108395. doi: 10.1016/j.mrrev.2021.108395. Epub 2021 Sep 28.
5
The crosstalk between viral RNA- and DNA-sensing mechanisms.病毒 RNA 和 DNA 感知机制的串扰。
Cell Mol Life Sci. 2021 Dec;78(23):7427-7434. doi: 10.1007/s00018-021-04001-7. Epub 2021 Oct 29.
6
Metabolic Perturbation Associated With COVID-19 Disease Severity and SARS-CoV-2 Replication.与 COVID-19 疾病严重程度和 SARS-CoV-2 复制相关的代谢紊乱。
Mol Cell Proteomics. 2021;20:100159. doi: 10.1016/j.mcpro.2021.100159. Epub 2021 Oct 5.
7
Circular RNA as an Additional Player in the Conflicts Between the Host and the Virus.环状 RNA 作为宿主与病毒冲突中的额外参与者。
Front Immunol. 2021 May 28;12:602006. doi: 10.3389/fimmu.2021.602006. eCollection 2021.
8
Identification of poly(ADP-ribose) polymerase 9 (PARP9) as a noncanonical sensor for RNA virus in dendritic cells.鉴定多聚(ADP-核糖)聚合酶 9(PARP9)为树突状细胞中 RNA 病毒的非典型传感器。
Nat Commun. 2021 May 11;12(1):2681. doi: 10.1038/s41467-021-23003-4.
9
Putative Novel Atypical BTV Serotype '36' Identified in Small Ruminants in Switzerland.瑞士小反刍动物中鉴定出新型疑似非典型 BTV 血清型 '36'。
Viruses. 2021 Apr 21;13(5):721. doi: 10.3390/v13050721.
10
The Antiviral Activities of Poly-ADP-Ribose Polymerases.聚 ADP 核糖聚合酶的抗病毒活性。
Viruses. 2021 Mar 30;13(4):582. doi: 10.3390/v13040582.