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通过 SI-eRAFT 和原位金属化双重信号扩增的 DNA 的超灵敏检测。

Ultrasensitive Detection of DNA via SI-eRAFT and in Situ Metalization Dual-Signal Amplification.

机构信息

School of Chemistry and Chemical Engineering , Liaocheng University , Liaocheng 252059 , People's Republic of China.

School of Environmental and Biological Engineering , Nanjing University of Science and Technology , Nanjing 210094 , People's Republic of China.

出版信息

Anal Chem. 2019 Jul 16;91(14):9198-9205. doi: 10.1021/acs.analchem.9b01961. Epub 2019 Jun 25.

Abstract

In this work, we report a new amplification strategy based on electrochemically mediated reversible addition-fragmentation chain transfer (eRAFT) and in situ metalization for electrochemical detection of DNA. First, peptide nucleic acid (PNA) probes were immobilized on the surface of the gold electrode, and when they hybridized with the target DNA, the chain transfer agent (CTA), 4-cyano-4-(phenylcarbonothioylthio)pentanoic acid (CPAD), of RAFT was connected to the PNA/DNA heteroduplex formed by the coordination bonding of Zr. Then glycosyloxyethyl methacrylates (GEMA) were assembled on the surface of the electrode by electrochemically mediated surface-initiated reversible addition-fragmentation chain transfer (SI-eRAFT) to form a polymer-containing sugar glucose. Next, the -hydroxyl groups on the polysaccharide molecular skeleton were oxidized to aldehyde groups by sodium periodate (NaIO). The aldehyde groups generated then reduce silver ions to silver particles deposited on the electrode surface in situ, and this system was then subjected to differential pulse voltammetry (DPV). Under optimal conditions, the intensity of the stripping current and the logarithm of the target DNA (tDNA) concentration has a good linear relationship in the range of 10 aM to 1 pM ( = 0.996), and the detection limit can go down to 5.4 aM (/ = 3). Moreover, the method is suitable for single-nucleotide polymorphism (SNP) analysis and has strong anti-interference ability for the analysis of target ssDNA in serum samples.

摘要

在这项工作中,我们报告了一种新的基于电化学介导可逆加成-断裂链转移(eRAFT)和原位金属化的扩增策略,用于电化学检测 DNA。首先,将肽核酸(PNA)探针固定在金电极表面,当它们与靶 DNA 杂交时,链转移剂(CTA),4-氰基-4-(苯甲硫基羰基硫代)戊酸(CPAD),与通过 Zr 的配位键形成的 PNA/DNA 杂双链体相连。然后,通过电化学介导的表面引发可逆加成-断裂链转移(SI-eRAFT)将糖基乙氧基甲基甲基丙烯酸酯(GEMA)组装在电极表面上,形成含有糖葡萄糖的聚合物。接下来,通过过碘酸钠(NaIO)将多糖分子骨架上的 -羟基氧化成醛基。生成的醛基将银离子还原为原位沉积在电极表面上的银颗粒,然后对该体系进行差分脉冲伏安法(DPV)检测。在最佳条件下,所得的剥离电流强度与目标 DNA(tDNA)浓度的对数在 10 aM 至 1 pM 的范围内具有良好的线性关系(= 0.996),检测限可低至 5.4 aM(/ = 3)。此外,该方法适用于单核苷酸多态性(SNP)分析,并且对血清样品中目标 ssDNA 的分析具有很强的抗干扰能力。

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