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本文引用的文献

1
The Patchy Distribution of Restriction⁻Modification System Genes and the Conservation of Orphan Methyltransferases in Halobacteria.限制修饰系统基因的不连续性分布与嗜盐古菌中孤儿甲基转移酶的保守性
Genes (Basel). 2019 Mar 19;10(3):233. doi: 10.3390/genes10030233.
2
Characterizing the DNA Methyltransferases of Haloferax volcanii via Bioinformatics, Gene Deletion, and SMRT Sequencing.通过生物信息学、基因缺失和单分子实时测序对沃氏嗜盐菌的DNA甲基转移酶进行表征
Genes (Basel). 2018 Feb 27;9(3):129. doi: 10.3390/genes9030129.
3
NCBI prokaryotic genome annotation pipeline.美国国立生物技术信息中心原核生物基因组注释管道
Nucleic Acids Res. 2016 Aug 19;44(14):6614-24. doi: 10.1093/nar/gkw569. Epub 2016 Jun 24.
4
Halophiles and their enzymes: negativity put to good use.嗜盐菌及其酶:变消极为有用之处。
Curr Opin Microbiol. 2015 Jun;25:120-6. doi: 10.1016/j.mib.2015.05.009. Epub 2015 Jun 9.
5
REBASE--a database for DNA restriction and modification: enzymes, genes and genomes.REBASE——一个关于DNA限制与修饰的数据库:酶、基因与基因组。
Nucleic Acids Res. 2015 Jan;43(Database issue):D298-9. doi: 10.1093/nar/gku1046. Epub 2014 Nov 5.
6
Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data.非杂交、基于长读长 SMRT 测序数据的完成微生物基因组组装。
Nat Methods. 2013 Jun;10(6):563-9. doi: 10.1038/nmeth.2474. Epub 2013 May 5.
7
The core and unique proteins of haloarchaea.嗜盐菌的核心和独特蛋白。
BMC Genomics. 2012 Jan 24;13:39. doi: 10.1186/1471-2164-13-39.
8
HaloWeb: the haloarchaeal genomes database.HaloWeb:嗜盐古菌基因组数据库。
Saline Syst. 2010 Dec 30;6:12. doi: 10.1186/1746-1448-6-12.
9
The information transfer system of halophilic archaea.嗜盐古菌的信息传递系统。
Plasmid. 2011 Mar;65(2):77-101. doi: 10.1016/j.plasmid.2010.11.005. Epub 2010 Nov 19.
10
LAGAN and Multi-LAGAN: efficient tools for large-scale multiple alignment of genomic DNA.LAGAN和多LAGAN:用于基因组DNA大规模多重比对的高效工具。
Genome Res. 2003 Apr;13(4):721-31. doi: 10.1101/gr.926603. Epub 2003 Mar 12.

两种极端嗜盐菌——死海嗜盐菌(Haloarcula marismortui)和地中海嗜盐菌(Haloferax mediterranei)的甲基化组

Methylomes of Two Extremely Halophilic Species, Haloarcula marismortui and Haloferax mediterranei.

作者信息

DasSarma Shiladitya, Fomenkov Alexey, DasSarma Satyajit L, Vincze Tamas, DasSarma Priya, Roberts Richard J

机构信息

Institute of Marine and Environmental Technology, Department of Microbiology and Immunology, University of Maryland-Baltimore, Baltimore, Maryland, USA.

New England Biolabs, Ipswich, Massachusetts, USA.

出版信息

Microbiol Resour Announc. 2019 Jul 3;8(27):e00577-19. doi: 10.1128/MRA.00577-19.

DOI:10.1128/MRA.00577-19
PMID:31270201
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6606915/
Abstract

The genomes of two extremely halophilic species, and , were sequenced using single-molecule real-time sequencing. The ∼4-Mbp genomes are GC rich with multiple large plasmids and two 4-methyl-cytosine patterns. Methyl transferases were incorporated into the Restriction Enzymes Database (REBASE), and gene annotation was incorporated into the Haloarchaeal Genomes Database (HaloWeb).

摘要

使用单分子实时测序技术对两种极端嗜盐菌的基因组进行了测序。这两个约4兆碱基对的基因组富含GC,含有多个大质粒和两种4-甲基胞嘧啶模式。甲基转移酶被纳入限制酶数据库(REBASE),基因注释被纳入嗜盐古菌基因组数据库(HaloWeb)。