School of Chemistry and Biochemistry, Georgia Institute of Technology, Atlanta, Georgia 30332.
Department of Molecular Medicine and Byrd Alzheimer's Research Institute, University of South Florida, Tampa, Florida 33613.
J Biol Chem. 2019 Aug 23;294(34):12717-12728. doi: 10.1074/jbc.RA119.009419. Epub 2019 Jul 2.
Nonsynonymous gene mutations can be beneficial, neutral, or detrimental to the stability, structure, and biological function of the encoded protein, but the effects of these mutations are often not readily predictable. For example, the β-propeller olfactomedin domain of myocilin (mOLF) exhibits a complex interrelationship among structure(s), stability, and aggregation. Numerous mutations within mOLF are linked to glaucoma; the resulting variants are less stable, aggregation-prone, and sequestered intracellularly, causing cytotoxicity. Here, we report the first stable mOLF variants carrying substitutions in the calcium-binding site that exhibit solution characteristics indistinguishable from those of glaucoma variants. Crystal structures of these stable variants at 1.8-2.0-Å resolution revealed features that we could not predict by molecular dynamics simulations, including loss of loop structure, helix unwinding, and a blade shift. Double mutants that combined a stabilizing substitution and a selected glaucoma-causing single-point mutant rescued folding and stability defects. In the context of full-length myocilin, secretion of stable single variants was indistinguishable from that of the WT protein, and the double mutants were secreted to varying extents. In summary, our finding that mOLF can tolerate particular substitutions that render the protein stable despite a conformational switch emphasizes the complexities in differentiating between benign and glaucoma-causing variants and provides new insight into the possible biological function of myocilin.
非 synonymous基因突变可能对编码蛋白的稳定性、结构和生物学功能有益、中性或有害,但这些突变的影响往往不易预测。例如,肌球蛋白(mOLF)的β-三叶螺旋蛋白结构域在结构、稳定性和聚集之间存在复杂的相互关系。mOLF 内的许多突变与青光眼有关;由此产生的变体稳定性降低,易聚集,并被隔离在细胞内,导致细胞毒性。在这里,我们报告了首例在钙结合位点发生取代的稳定 mOLF 变体,其溶液特性与青光眼变体无法区分。这些稳定变体的晶体结构分辨率为 1.8-2.0-Å,揭示了一些我们无法通过分子动力学模拟预测的特征,包括环结构丢失、螺旋展开和叶片移位。同时结合稳定取代和选定的青光眼单点突变的双突变体可恢复折叠和稳定性缺陷。在全长肌球蛋白的背景下,稳定单变体的分泌与 WT 蛋白的分泌无法区分,而双突变体的分泌程度不同。总之,我们发现 mOLF 可以耐受特定的取代,这些取代使蛋白尽管发生构象转换仍保持稳定,这强调了区分良性和致青光眼变体的复杂性,并为肌球蛋白的可能生物学功能提供了新的见解。