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台湾地区新发现的五个变异的功能后果预测。

Prediction of functional consequences of the five newly discovered variations in Taiwan.

作者信息

Chiu Yen-Hui, Liu Yu-Ning, Chen Hsiao-Jan, Chang Ying-Chen, Kao Shu-Min, Liu Mei-Ying, Weng Ying-Yen, Hsiao Kwang-Jen, Liu Tze-Tze

机构信息

Department of Education and Research, Taipei City Hospital, Taipei, Taiwan.

Department of Biotechnology and Pharmaceutical Technology, Yuanpei University of Medical Technology, Hsinchu, Taiwan.

出版信息

Data Brief. 2019 Jun 11;25:104129. doi: 10.1016/j.dib.2019.104129. eCollection 2019 Aug.

DOI:10.1016/j.dib.2019.104129
PMID:31294066
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6595892/
Abstract

Glucose-6-phosphate dehydrogenase deficiency (G6PD deficiency; OMIM #300908) is the most common inborn error disorders worldwide. While the G6PD is the key enzyme of removing oxidative stress in erythrocytes, the early diagnosis is utmost vital to prevent chronic and drug-, food- or infection-induced hemolytic anemia. The characterization of the mutations is also important for the subsequent genetic counseling, especially for female carrier with ambiguous enzyme activities and males with mild mutations. While multiplex SNaPshot assay and Sanger sequencing were performed on 500 G6PD deficient males, five newly discovered variations, namely c.187G > A (p.E63K), c.585G > C (p.Q195H), c.586A > T (p.I196F), c.743G > A (p.G248D), and c.1330G > A (p.V444I) were detected in the other six patients. These variants were previously named as the Pingtung, Tainan, Changhua, Chiayi, and Tainan-2 variants, respectively. The analysis, as well as the prediction of the structure of the resultant mutant G6PD protein indicated that these five newly discovered variants might be disease causing mutations.

摘要

葡萄糖-6-磷酸脱氢酶缺乏症(G6PD缺乏症;OMIM #300908)是全球最常见的先天性疾病。由于G6PD是红细胞中消除氧化应激的关键酶,早期诊断对于预防慢性以及药物、食物或感染诱发的溶血性贫血至关重要。突变特征对于后续的遗传咨询也很重要,特别是对于酶活性不明确的女性携带者和具有轻度突变的男性。在对500名G6PD缺乏症男性进行多重SNaPshot分析和桑格测序时,在另外6名患者中检测到5个新发现的变异,即c.187G>A(p.E63K)、c.585G>C(p.Q195H)、c.586A>T(p.I196F)、c.743G>A(p.G248D)和c.1330G>A(p.V444I)。这些变异先前分别被命名为屏东、台南、彰化、嘉义和台南-2变异。对所得突变G6PD蛋白结构的分析以及预测表明,这5个新发现的变异可能是致病突变。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2d4d/6595892/7e5621917d37/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2d4d/6595892/8fef4e7cdca6/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2d4d/6595892/9a67752fd532/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2d4d/6595892/f25cf932b624/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2d4d/6595892/7e5621917d37/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2d4d/6595892/8fef4e7cdca6/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2d4d/6595892/9a67752fd532/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2d4d/6595892/f25cf932b624/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2d4d/6595892/7e5621917d37/gr4.jpg

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Role of protein structure in variant annotation: structural insight of mutations causing 6-pyruvoyl-tetrahydropterin synthase deficiency.蛋白质结构在变异注释中的作用:导致 6-丙酮酰四氢蝶呤合成酶缺乏症的突变的结构见解。
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