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人纤维蛋白溶酶原与化脓性链球菌 M 蛋白受体结合区复合物的溶液结构模型。

Solution structural model of the complex of the binding regions of human plasminogen with its M-protein receptor from Streptococcus pyogenes.

机构信息

W.M. Keck Center for Transgene Research, University of Notre Dame, Notre Dame, IN 46556, USA.

Department of Biochemistry and Molecular Biology, Monash University, Clayton 3800 VIC, Australia.

出版信息

J Struct Biol. 2019 Oct 1;208(1):18-29. doi: 10.1016/j.jsb.2019.07.005. Epub 2019 Jul 10.

Abstract

VEK50 is a truncated peptide from a Streptococcal pyogenes surface human plasminogen (hPg) binding M-protein (PAM). VEK50 contains the full A-domain of PAM, which is responsible for its low nanomolar binding to hPg. The interaction of VEK50 with kringle 2, the PAM-binding domain in hPg (K2), has been studied by high-resolution NMR spectroscopy. The data show that each VEK50 monomer in solution contains two tight binding sites for K2, one each in the a1- (RH1; RH) and a2- (RH2; RH) repeats within the A-domain of VEK50. Two mutant forms of VEK50, viz., VEK50[RH1/AA] (VEK50) and VEK50[RH2/AA] (VEK50), were designed by replacing each RH with AA, thus eliminating one of the K2 binding sites within VEK50, and allowing separate study of each binding site. Using C- and N-labeled peptides, NMR-derived solution structures of VEK50 in its complex with K2 were solved. We conclude that the A-domain of PAM can accommodate two molecules of K2 docked within a short distance of each other, and the strength of the binding is slightly different for each site. The solution structure of the VEK50/K2, complex, which is a reductionist model of the PAM/hPg complex, provides insights for the binding mechanism of PAM to a host protein, a process that is critical to S. pyogenes virulence.

摘要

VEK50 是一种从酿脓链球菌表面人纤溶酶原(hPg)结合 M 蛋白(PAM)截断的肽。VEK50 包含 PAM 的完整 A 结构域,该结构域负责其与 hPg 的低纳摩尔结合。通过高分辨率 NMR 光谱研究了 VEK50 与 PAM 结合域(K2)中纤溶酶原kringle 2 的相互作用。数据表明,溶液中的每个 VEK50 单体在 A 结构域中各含有两个紧密结合的 K2 结合位点,一个位于 a1-(RH1;RH)重复序列,另一个位于 a2-(RH2;RH)重复序列内。通过用 AA 取代每个 RH,设计了两种 VEK50 的突变形式,即 VEK50[RH1/AA](VEK50)和 VEK50[RH2/AA](VEK50),从而消除了 VEK50 内的一个 K2 结合位点,并允许分别研究每个结合位点。使用 C 和 N 标记的肽,通过 NMR 解决了 VEK50 与其与 K2 复合物的溶液结构。我们得出的结论是,PAM 的 A 结构域可以容纳两个彼此靠近的 K2 分子,每个位点的结合强度略有不同。VEK50/K2 复合物的溶液结构是 PAM/hPg 复合物的简化模型,为 PAM 与宿主蛋白结合的机制提供了见解,这是酿脓链球菌毒力的关键过程。

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