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Solution structural model of the complex of the binding regions of human plasminogen with its M-protein receptor from Streptococcus pyogenes.人纤维蛋白溶酶原与化脓性链球菌 M 蛋白受体结合区复合物的溶液结构模型。
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Binding of the kringle-2 domain of human plasminogen to streptococcal PAM-type M-protein causes dissociation of PAM dimers.人纤溶酶原kringle-2 结构域与链球菌 PAM 型 M 蛋白的结合导致 PAM 二聚体解离。
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Inactivation of the lysine binding sites of human plasminogen (hPg) reveals novel structural requirements for the tight hPg conformation, M-protein binding, and rapid activation.人纤溶酶原(hPg)赖氨酸结合位点的失活揭示了紧密hPg构象、M蛋白结合和快速激活的新结构要求。
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The lack of binding of VEK-30, an internal peptide from the group A streptococcal M-like protein, PAM, to murine plasminogen is due to two amino acid replacements in the plasminogen kringle-2 domain.A群链球菌M样蛋白PAM的内部肽段VEK-30与小鼠纤溶酶原缺乏结合,这是由于纤溶酶原kringle-2结构域中的两个氨基酸替换所致。
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A local α-helix drives structural evolution of streptococcal M-protein affinity for host human plasminogen.局部α-螺旋驱动链球菌M蛋白对宿主人纤溶酶原亲和力的结构演变。
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Variations in the secondary structures of PAM proteins influence their binding affinities to human plasminogen.PAM 蛋白二级结构的变化影响其与人纤溶酶原的结合亲和力。
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Binding of the kringle-2 domain of human plasminogen to streptococcal PAM-type M-protein causes dissociation of PAM dimers.人纤溶酶原kringle-2 结构域与链球菌 PAM 型 M 蛋白的结合导致 PAM 二聚体解离。
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5
Streptococcus co-opts a conformational lock in human plasminogen to facilitate streptokinase cleavage and bacterial virulence.链球菌通过构象锁来攫取人纤溶酶原,从而促进链激酶切割和细菌毒力。
J Biol Chem. 2021 Jan-Jun;296:100099. doi: 10.1074/jbc.RA120.016262. Epub 2020 Nov 24.
6
A local α-helix drives structural evolution of streptococcal M-protein affinity for host human plasminogen.局部α-螺旋驱动链球菌M蛋白对宿主人纤溶酶原亲和力的结构演变。
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The M Protein of Streptococcus pyogenes Strain AP53 Retains Cell Surface Functional Plasminogen Binding after Inactivation of the Sortase A Gene.化脓性链球菌 AP53 株 M 蛋白在 sortase A 基因失活后保留细胞表面功能的纤溶酶原结合。
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本文引用的文献

1
Variations in the secondary structures of PAM proteins influence their binding affinities to human plasminogen.PAM 蛋白二级结构的变化影响其与人纤溶酶原的结合亲和力。
J Struct Biol. 2019 May 1;206(2):193-203. doi: 10.1016/j.jsb.2019.03.003. Epub 2019 Mar 14.
2
Contributions of different modules of the plasminogen-binding Streptococcus pyogenes M-protein that mediate its functional dimerization.纤溶酶原结合型酿脓链球菌 M 蛋白不同模块对其功能二聚化的贡献。
J Struct Biol. 2018 Nov;204(2):151-164. doi: 10.1016/j.jsb.2018.07.017. Epub 2018 Jul 30.
3
Conformationally organized lysine isosteres in M protein mediate direct high-affinity binding to human plasminogen.M蛋白中构象有序的赖氨酸类似物介导与人类纤溶酶原的直接高亲和力结合。
J Biol Chem. 2017 Sep 8;292(36):15016-15027. doi: 10.1074/jbc.M117.794198. Epub 2017 Jul 19.
4
Variable region in streptococcal M-proteins provides stable binding with host fibrinogen for plasminogen-mediated bacterial invasion.链球菌M蛋白中的可变区为纤溶酶原介导的细菌入侵提供了与宿主纤维蛋白原的稳定结合。
J Biol Chem. 2017 Apr 21;292(16):6775-6785. doi: 10.1074/jbc.M116.768937. Epub 2017 Mar 9.
5
Phenotypic differentiation of Streptococcus pyogenes populations is induced by recombination-driven gene-specific sweeps.表型分化的酿脓链球菌种群是由重组驱动的基因特异性扫荡诱导的。
Sci Rep. 2016 Nov 8;6:36644. doi: 10.1038/srep36644.
6
Conserved patterns hidden within group A Streptococcus M protein hypervariability recognize human C4b-binding protein.A 组链球菌 M 蛋白高度变异性中隐藏的保守模式可识别人 C4b 结合蛋白。
Nat Microbiol. 2016 Sep 5;1(11):16155. doi: 10.1038/nmicrobiol.2016.155.
7
Coiled-coil destabilizing residues in the group A Streptococcus M1 protein are required for functional interaction.A组链球菌M1蛋白中卷曲螺旋不稳定残基是功能相互作用所必需的。
Proc Natl Acad Sci U S A. 2016 Aug 23;113(34):9515-20. doi: 10.1073/pnas.1606160113. Epub 2016 Aug 10.
8
Genomic Characterization of a Pattern D Streptococcus pyogenes emm53 Isolate Reveals a Genetic Rationale for Invasive Skin Tropicity.一株D型化脓性链球菌emm53分离株的基因组特征揭示了侵袭性皮肤嗜性的遗传原理。
J Bacteriol. 2016 May 27;198(12):1712-24. doi: 10.1128/JB.01019-15. Print 2016 Jun 15.
9
Group A Streptococcus exploits human plasminogen for bacterial translocation across epithelial barrier via tricellular tight junctions.A组链球菌利用人纤溶酶原通过三细胞紧密连接实现细菌跨上皮屏障的转运。
Sci Rep. 2016 Jan 29;7:20069. doi: 10.1038/srep20069.
10
The HADDOCK2.2 Web Server: User-Friendly Integrative Modeling of Biomolecular Complexes.HADDOCK2.2 网页服务器:生物分子复合物的用户友好型综合建模
J Mol Biol. 2016 Feb 22;428(4):720-725. doi: 10.1016/j.jmb.2015.09.014. Epub 2015 Sep 26.

人纤维蛋白溶酶原与化脓性链球菌 M 蛋白受体结合区复合物的溶液结构模型。

Solution structural model of the complex of the binding regions of human plasminogen with its M-protein receptor from Streptococcus pyogenes.

机构信息

W.M. Keck Center for Transgene Research, University of Notre Dame, Notre Dame, IN 46556, USA.

Department of Biochemistry and Molecular Biology, Monash University, Clayton 3800 VIC, Australia.

出版信息

J Struct Biol. 2019 Oct 1;208(1):18-29. doi: 10.1016/j.jsb.2019.07.005. Epub 2019 Jul 10.

DOI:10.1016/j.jsb.2019.07.005
PMID:31301349
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6983471/
Abstract

VEK50 is a truncated peptide from a Streptococcal pyogenes surface human plasminogen (hPg) binding M-protein (PAM). VEK50 contains the full A-domain of PAM, which is responsible for its low nanomolar binding to hPg. The interaction of VEK50 with kringle 2, the PAM-binding domain in hPg (K2), has been studied by high-resolution NMR spectroscopy. The data show that each VEK50 monomer in solution contains two tight binding sites for K2, one each in the a1- (RH1; RH) and a2- (RH2; RH) repeats within the A-domain of VEK50. Two mutant forms of VEK50, viz., VEK50[RH1/AA] (VEK50) and VEK50[RH2/AA] (VEK50), were designed by replacing each RH with AA, thus eliminating one of the K2 binding sites within VEK50, and allowing separate study of each binding site. Using C- and N-labeled peptides, NMR-derived solution structures of VEK50 in its complex with K2 were solved. We conclude that the A-domain of PAM can accommodate two molecules of K2 docked within a short distance of each other, and the strength of the binding is slightly different for each site. The solution structure of the VEK50/K2, complex, which is a reductionist model of the PAM/hPg complex, provides insights for the binding mechanism of PAM to a host protein, a process that is critical to S. pyogenes virulence.

摘要

VEK50 是一种从酿脓链球菌表面人纤溶酶原(hPg)结合 M 蛋白(PAM)截断的肽。VEK50 包含 PAM 的完整 A 结构域,该结构域负责其与 hPg 的低纳摩尔结合。通过高分辨率 NMR 光谱研究了 VEK50 与 PAM 结合域(K2)中纤溶酶原kringle 2 的相互作用。数据表明,溶液中的每个 VEK50 单体在 A 结构域中各含有两个紧密结合的 K2 结合位点,一个位于 a1-(RH1;RH)重复序列,另一个位于 a2-(RH2;RH)重复序列内。通过用 AA 取代每个 RH,设计了两种 VEK50 的突变形式,即 VEK50[RH1/AA](VEK50)和 VEK50[RH2/AA](VEK50),从而消除了 VEK50 内的一个 K2 结合位点,并允许分别研究每个结合位点。使用 C 和 N 标记的肽,通过 NMR 解决了 VEK50 与其与 K2 复合物的溶液结构。我们得出的结论是,PAM 的 A 结构域可以容纳两个彼此靠近的 K2 分子,每个位点的结合强度略有不同。VEK50/K2 复合物的溶液结构是 PAM/hPg 复合物的简化模型,为 PAM 与宿主蛋白结合的机制提供了见解,这是酿脓链球菌毒力的关键过程。