Schreiber Falk, Sommer Björn, Bader Gary D, Gleeson Padraig, Golebiewski Martin, Hucka Michael, Keating Sarah M, König Matthias, Myers Chris, Nickerson David, Waltemath Dagmar
Department of Computer and Information Science, University of Konstanz, Konstanz, Germany.
Faculty of IT, Monash University, Clayton, Australia.
J Integr Bioinform. 2019 Jul 13;16(2):20190035. doi: 10.1515/jib-2019-0035.
This special issue of the Journal of Integrative Bioinformatics presents an overview of COMBINE standards and their latest specifications. The standards cover representation formats for computational modeling in synthetic and systems biology and include BioPAX, CellML, NeuroML, SBML, SBGN, SBOL and SED-ML. The articles in this issue contain updated specifications of SBGN Process Description Level 1 Version 2, SBML Level 3 Core Version 2 Release 2, SBOL Version 2.3.0, and SBOL Visual Version 2.1.
《整合生物信息学杂志》的这一特刊概述了COMBINE标准及其最新规范。这些标准涵盖了合成生物学和系统生物学中计算建模的表示格式,包括BioPAX、CellML、NeuroML、SBML、SBGN、SBOL和SED-ML。本期文章包含了SBGN过程描述第1级第2版、SBML第3级核心第2版第2次发布、SBOL第2.3.0版以及SBOL可视化第2.1版的更新规范。