• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

玉米叶片在玉米黑粉菌诱导肿瘤形成过程中细胞类型特异性转录重编程。

Cell type specific transcriptional reprogramming of maize leaves during Ustilago maydis induced tumor formation.

机构信息

Botanical Institute and Cluster of Excellence on Plant Sciences (CEPLAS), BioCenter, University of Cologne, Zülpicher Str. 47a, Cologne, 50674, Germany.

Center for Familial Breast and Ovarian Cancer, Medical Faculty, University Hospital Cologne, University of Cologne, Cologne, 50931, Germany.

出版信息

Sci Rep. 2019 Jul 15;9(1):10227. doi: 10.1038/s41598-019-46734-3.

DOI:10.1038/s41598-019-46734-3
PMID:31308451
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6629649/
Abstract

Ustilago maydis is a biotrophic pathogen and well-established genetic model to understand the molecular basis of biotrophic interactions. U. maydis suppresses plant defense and induces tumors on all aerial parts of its host plant maize. In a previous study we found that U. maydis induced leaf tumor formation builds on two major processes: the induction of hypertrophy in the mesophyll and the induction of cell division (hyperplasia) in the bundle sheath. In this study we analyzed the cell-type specific transcriptome of maize leaves 4 days post infection. This analysis allowed identification of key features underlying the hypertrophic and hyperplasic cell identities derived from mesophyll and bundle sheath cells, respectively. We examined the differentially expressed (DE) genes with particular focus on maize cell cycle genes and found that three A-type cyclins, one B-, D- and T-type are upregulated in the hyperplasic tumorous cells, in which the U. maydis effector protein See1 promotes cell division. Additionally, most of the proteins involved in the formation of the pre-replication complex (pre-RC, that assure that each daughter cell receives identic DNA copies), the transcription factors E2F and DPa as well as several D-type cyclins are deregulated in the hypertrophic cells.

摘要

玉米黑粉菌是一种生物营养性病原体,也是研究生物营养性相互作用分子基础的成熟遗传模型。玉米黑粉菌抑制植物防御系统,并在其宿主玉米的所有气生部分诱导肿瘤。在之前的研究中,我们发现玉米黑粉菌诱导叶片肿瘤形成依赖于两个主要过程:在叶肉中诱导肥大和在维管束鞘中诱导细胞分裂(增生)。在这项研究中,我们分析了感染后 4 天玉米叶片的细胞类型特异性转录组。该分析鉴定了肥大和增生细胞特性的关键特征,分别源自叶肉和维管束鞘细胞。我们研究了差异表达(DE)基因,特别关注玉米细胞周期基因,发现三个 A 型细胞周期蛋白、一个 B 型、D 型和 T 型在增生性肿瘤细胞中上调,其中玉米黑粉菌效应蛋白 See1 促进细胞分裂。此外,参与前复制复合物(pre-RC)形成的大多数蛋白质、转录因子 E2F 和 DPa 以及几个 D 型细胞周期蛋白在肥大细胞中失调。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0916/6629649/3c56acfb8d1a/41598_2019_46734_Fig8_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0916/6629649/2701e96a5946/41598_2019_46734_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0916/6629649/8c2fe25b464b/41598_2019_46734_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0916/6629649/cd612924feec/41598_2019_46734_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0916/6629649/613299d699bc/41598_2019_46734_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0916/6629649/b13143d0d9a0/41598_2019_46734_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0916/6629649/0d223b04cc62/41598_2019_46734_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0916/6629649/35a8b4a400dc/41598_2019_46734_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0916/6629649/3c56acfb8d1a/41598_2019_46734_Fig8_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0916/6629649/2701e96a5946/41598_2019_46734_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0916/6629649/8c2fe25b464b/41598_2019_46734_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0916/6629649/cd612924feec/41598_2019_46734_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0916/6629649/613299d699bc/41598_2019_46734_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0916/6629649/b13143d0d9a0/41598_2019_46734_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0916/6629649/0d223b04cc62/41598_2019_46734_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0916/6629649/35a8b4a400dc/41598_2019_46734_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0916/6629649/3c56acfb8d1a/41598_2019_46734_Fig8_HTML.jpg

相似文献

1
Cell type specific transcriptional reprogramming of maize leaves during Ustilago maydis induced tumor formation.玉米叶片在玉米黑粉菌诱导肿瘤形成过程中细胞类型特异性转录重编程。
Sci Rep. 2019 Jul 15;9(1):10227. doi: 10.1038/s41598-019-46734-3.
2
How to make a tumour: cell type specific dissection of Ustilago maydis-induced tumour development in maize leaves.如何生成肿瘤:玉米叶片中玉米黑粉菌诱导肿瘤发生的细胞类型特异性剖析。
New Phytol. 2018 Mar;217(4):1681-1695. doi: 10.1111/nph.14960. Epub 2018 Jan 4.
3
Dissecting defense-related and developmental transcriptional responses of maize during Ustilago maydis infection and subsequent tumor formation.剖析玉米在玉米黑粉菌感染及随后肿瘤形成过程中与防御相关和发育相关的转录反应。
Plant Physiol. 2005 Jul;138(3):1774-84. doi: 10.1104/pp.105.061200. Epub 2005 Jun 24.
4
Maize tumors caused by Ustilago maydis require organ-specific genes in host and pathogen.玉米瘤由玉米黑粉菌引起,需要宿主和病原体中特定的器官基因。
Science. 2010 Apr 2;328(5974):89-92. doi: 10.1126/science.1185775.
5
Reprogramming a maize plant: transcriptional and metabolic changes induced by the fungal biotroph Ustilago maydis.对玉米植株进行重编程:真菌活体营养型黑粉菌诱导的转录和代谢变化
Plant J. 2008 Oct;56(2):181-195. doi: 10.1111/j.1365-313X.2008.03590.x. Epub 2008 Jun 28.
6
Systemic virus-induced gene silencing allows functional characterization of maize genes during biotrophic interaction with Ustilago maydis.系统性病毒诱导的基因沉默使我们能够在玉米与玉蜀黍黑粉菌的生物亲和互作过程中对玉米基因进行功能表征。
New Phytol. 2011 Jan;189(2):471-83. doi: 10.1111/j.1469-8137.2010.03474.x. Epub 2010 Oct 11.
7
Utilizing virus-induced gene silencing for the functional characterization of maize genes during infection with the fungal pathogen Ustilago maydis.利用病毒诱导的基因沉默技术对玉米在感染真菌病原体玉米黑粉菌期间的基因进行功能表征。
Methods Mol Biol. 2013;975:47-60. doi: 10.1007/978-1-62703-278-0_4.
8
Virulence of the maize smut Ustilago maydis is shaped by organ-specific effectors.玉米黑粉菌Ustilago maydis的毒力由器官特异性效应因子塑造。
Mol Plant Pathol. 2014 Oct;15(8):780-9. doi: 10.1111/mpp.12133.
9
Comparative transcriptome profiling identifies maize line specificity of fungal effectors in the maize-Ustilago maydis interaction.比较转录组分析鉴定了玉米-玉蜀黍黑粉菌互作中真菌效应因子的玉米系特异性。
Plant J. 2021 May;106(3):733-752. doi: 10.1111/tpj.15195. Epub 2021 Apr 3.
10
A Secreted Effector Protein of Ustilago maydis Guides Maize Leaf Cells to Form Tumors.玉米黑粉菌的一种分泌效应蛋白引导玉米叶细胞形成肿瘤。
Plant Cell. 2015 Apr;27(4):1332-51. doi: 10.1105/tpc.114.131086. Epub 2015 Apr 17.

引用本文的文献

1
Heat stress at the bicellular stage inhibits sperm cell development and transport into pollen tubes.在双核期的热应激会抑制精子细胞的发育并阻止其进入花粉管。
Plant Physiol. 2024 Jun 28;195(3):2111-2128. doi: 10.1093/plphys/kiae087.
2
A transcriptional activator effector of Ustilago maydis regulates hyperplasia in maize during pathogen-induced tumor formation.玉米黑粉菌的转录激活效应因子调控病原菌诱导的玉米肿瘤形成中的过度增生。
Nat Commun. 2023 Oct 23;14(1):6722. doi: 10.1038/s41467-023-42522-w.
3
Genome-Wide Characterization of the Maize ( L.) WRKY Transcription Factor Family and Their Responses to .

本文引用的文献

1
DiSUMO-LIKE Interacts with RNA-Binding Proteins and Affects Cell-Cycle Progression during Maize Embryogenesis.SUMO 样蛋白与 RNA 结合蛋白相互作用并影响玉米胚胎发生过程中的细胞周期进程。
Curr Biol. 2018 May 21;28(10):1548-1560.e5. doi: 10.1016/j.cub.2018.03.066. Epub 2018 May 3.
2
The cyclin-dependent kinase G group defines a thermo-sensitive alternative splicing circuit modulating the expression of Arabidopsis ATU2AF65A.细胞周期蛋白依赖性激酶 G 组定义了一个热敏性的替代剪接回路,调节拟南芥 ATU2AF65A 的表达。
Plant J. 2018 Jun;94(6):1010-1022. doi: 10.1111/tpj.13914. Epub 2018 May 10.
3
SUMO targets the APC/C to regulate transition from metaphase to anaphase.
玉米(L.)WRKY转录因子家族的全基因组特征及其对……的响应
Int J Mol Sci. 2023 Oct 5;24(19):14916. doi: 10.3390/ijms241914916.
4
Combination of in vivo proximity labeling and co-immunoprecipitation identifies the host target network of a tumor-inducing effector in the fungal maize pathogen Ustilago maydis.体内邻近标记与共免疫沉淀结合鉴定真菌玉米病原体 Ustilago maydis 中诱导肿瘤效应子的宿主靶标网络。
J Exp Bot. 2023 Aug 17;74(15):4736-4750. doi: 10.1093/jxb/erad188.
5
Special issue: Genetics of maize-microbe interactions.特刊:玉米与微生物相互作用的遗传学
Mol Plant Pathol. 2023 Jul;24(7):671-674. doi: 10.1111/mpp.13348. Epub 2023 May 20.
6
Early infection response of fungal biotroph in maize.玉米中真菌活体营养型的早期感染反应
Front Plant Sci. 2022 Sep 9;13:970897. doi: 10.3389/fpls.2022.970897. eCollection 2022.
7
Dissection of the Complex Transcription and Metabolism Regulation Networks Associated with Maize Resistance to .解析与玉米抗. 相关的复杂转录和代谢调控网络
Genes (Basel). 2021 Nov 12;12(11):1789. doi: 10.3390/genes12111789.
8
Physiological Basis of Smut Infectivity in the Early Stages of Sugar Cane Colonization.甘蔗定殖早期黑穗病菌侵染性的生理基础
J Fungi (Basel). 2021 Jan 12;7(1):44. doi: 10.3390/jof7010044.
9
Understanding Infection of Multiple Maize Organs.了解玉米多个器官的感染情况。
J Fungi (Basel). 2020 Dec 27;7(1):8. doi: 10.3390/jof7010008.
10
Roles of plant retinoblastoma protein: cell cycle and beyond.植物视网膜母细胞瘤蛋白的作用:细胞周期及其他。
EMBO J. 2020 Oct 1;39(19):e105802. doi: 10.15252/embj.2020105802. Epub 2020 Aug 31.
SUMO 将 APC/C 作为靶标以调控从有丝分裂中期向后期的转变。
Nat Commun. 2018 Mar 16;9(1):1119. doi: 10.1038/s41467-018-03486-4.
4
Sumoylation promotes optimal APC/C Activation and Timely Anaphase.SUMOylation 促进 APC/C 的最佳激活和适时进入后期。
Elife. 2018 Mar 8;7:e29539. doi: 10.7554/eLife.29539.
5
Lignins: Biosynthesis and Biological Functions in Plants.木质素:植物中的生物合成和生物学功能。
Int J Mol Sci. 2018 Jan 24;19(2):335. doi: 10.3390/ijms19020335.
6
How to make a tumour: cell type specific dissection of Ustilago maydis-induced tumour development in maize leaves.如何生成肿瘤:玉米叶片中玉米黑粉菌诱导肿瘤发生的细胞类型特异性剖析。
New Phytol. 2018 Mar;217(4):1681-1695. doi: 10.1111/nph.14960. Epub 2018 Jan 4.
7
Adapted Biotroph Manipulation of Plant Cell Ploidy.适应生物对植物细胞倍性的操纵。
Annu Rev Phytopathol. 2017 Aug 4;55:537-564. doi: 10.1146/annurev-phyto-080516-035458. Epub 2017 Jun 15.
8
Insights into Host Cell Modulation and Induction of New Cells by the Corn Smut .对玉米黑粉菌对宿主细胞的调节及新细胞诱导的见解
Front Plant Sci. 2017 May 29;8:899. doi: 10.3389/fpls.2017.00899. eCollection 2017.
9
Differential analysis of RNA-seq incorporating quantification uncertainty.整合定量不确定性的 RNA-seq 差异分析。
Nat Methods. 2017 Jul;14(7):687-690. doi: 10.1038/nmeth.4324. Epub 2017 Jun 5.
10
agriGO v2.0: a GO analysis toolkit for the agricultural community, 2017 update.agriGO v2.0:农业社区的 GO 分析工具包,2017 年更新。
Nucleic Acids Res. 2017 Jul 3;45(W1):W122-W129. doi: 10.1093/nar/gkx382.