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复杂的传播模式和与年龄相关的自私性 mtDNA 缺失的动态变化。

Complex Transmission Patterns and Age-Related Dynamics of a Selfish mtDNA Deletion.

机构信息

Department of Biology, Portland State University, Portland, OR 97201, USA.

Institute for Ecology and Evolution, University of Oregon, Eugene, OR 97403, USA.

出版信息

Integr Comp Biol. 2019 Oct 1;59(4):983-993. doi: 10.1093/icb/icz128.

Abstract

Despite wide-ranging implications of selfish mitochondrial DNA (mtDNA) elements for human disease and topics in evolutionary biology (e.g., speciation), the forces controlling their formation, age-related accumulation, and offspring transmission remain largely unknown. Selfish mtDNA poses a significant challenge to genome integrity, mitochondrial function, and organismal fitness. For instance, numerous human diseases are associated with mtDNA mutations; however, few genetic systems can simultaneously represent pathogenic mitochondrial genome evolution and inheritance. The nematode Caenorhabditis briggsae is one such system. Natural C. briggsae isolates harbor varying levels of a large-scale deletion affecting the mitochondrial nduo-5 gene, termed nad5Δ. A subset of these isolates contains putative compensatory mutations that may reduce the risk of deletion formation. We studied the dynamics of nad5Δ heteroplasmy levels during animal development and transmission from mothers to offspring in genetically diverse C. briggsae natural isolates. Results support previous work demonstrating that nad5Δ is a selfish element and that heteroplasmy levels of this deletion can be quite plastic, exhibiting high degrees of inter-family variability and divergence between generations. The latter is consistent with a mitochondrial bottleneck effect, and contrasts with previous findings from a laboratory-derived model uaDf5 mtDNA deletion in C. elegans. However, we also found evidence for among-isolate differences in the ability to limit nad5Δ accumulation, the pattern of which suggested that forces other than the compensatory mutations are important in protecting individuals and populations from rampant mtDNA deletion expansion over short time scales.

摘要

尽管自私的线粒体 DNA(mtDNA)元素对人类疾病和进化生物学的主题(例如物种形成)有广泛的影响,但控制其形成、与年龄相关的积累和后代传递的力量在很大程度上仍然未知。自私的 mtDNA 对基因组完整性、线粒体功能和机体适应性构成重大挑战。例如,许多人类疾病都与 mtDNA 突变有关;然而,很少有遗传系统可以同时代表致病性线粒体基因组的进化和遗传。秀丽隐杆线虫就是这样的系统之一。天然的秀丽隐杆线虫分离株含有不同程度的影响线粒体 nduo-5 基因的大规模缺失,称为 nad5Δ。这些分离株中的一部分含有可能降低缺失形成风险的假定补偿突变。我们研究了 nad5Δ异质体水平在动物发育过程中和从母亲向后代传递过程中的动态变化,这些研究是在遗传多样性的天然秀丽隐杆线虫分离株中进行的。结果支持先前的工作,表明 nad5Δ是一种自私的元素,并且这种缺失的异质体水平具有相当大的可变性,表现出高度的家族间变异性和代际间的分歧。后者与线粒体瓶颈效应一致,与之前在秀丽隐杆线虫实验室衍生的 uaDf5 mtDNA 缺失模型中的发现形成对比。然而,我们也发现了在限制 nad5Δ积累方面的分离株间差异的证据,其模式表明,在短时间尺度内,除了补偿突变之外,其他力量在保护个体和种群免受猖獗的 mtDNA 缺失扩张方面也很重要。

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