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基因DNA甲基化水平与1型糖尿病患者的肌肉和呼吸状况相关。

gene DNA methylation levels are associated with muscular and respiratory profiles in DM1.

作者信息

Légaré Cécilia, Overend Gayle, Guay Simon-Pierre, Monckton Darren G, Mathieu Jean, Gagnon Cynthia, Bouchard Luigi

机构信息

Department of Biochemistry (C.L., S.-P.G., L.B.), Université de Sherbrooke, Sherbrooke; ECOGENE-21 Biocluster (C.L., S.-P.G., L.B.), Chicoutimi, Québec, Canada; Groupe de Recherche interdisciplinaire sur les maladies neuromusculaires (C.L., J.M., C.G., L.B.), Saguenay, Canada; Institute of Molecular (G.O., D.G.M.), Cell and Systems Biology, University of Glasgow, United Kingdom; and Centre de Recherche Charles-Le-Moyne-Saguenay-Lac-StJean sur les innovations en santé (J.M., C.G.), Faculté de médecine et des sciences de la santé, Université de Sherbrooke, Canada.

出版信息

Neurol Genet. 2019 May 23;5(3):e338. doi: 10.1212/NXG.0000000000000338. eCollection 2019 Jun.

Abstract

OBJECTIVE

To assess the effects of dystrophia myotonica protein kinase () DNA methylation (DNAme) epivariation on muscular and respiratory profiles in patients with myotonic dystrophy type 1 (DM1).

METHODS

Phenotypes were assessed with standardized measures. Pyrosequencing of bisulfite-treated DNA was used to quantify DNAme levels in blood from 90 patients with DM1 (adult form). Modal CTG repeat length was assessed using small-pool PCR. The presence of Acil-sensitive variant repeats was also tested.

RESULTS

DNAme levels upstream of the CTG expansion (exon and intron 11) were correlated with modal CTG repeat length (r = -0.224, = 0.040; r = -0.317, = 0.003; and r = -0.241, = 0.027), whereas correlations were observed with epivariations downstream of the CTG repeats (r = 0.227; = 0.037). The presence of a variant repeat was associated with higher DNAme levels at multiple CpG sites (up to 10% higher; = 0.001). Stepwise multiple linear regression modeling showed that DNAme contributed significantly and independently to explain phenotypic variability in ankle dorsiflexor (3 CpGs: = 0.001, 0.013, and 0.001), grip ( = 0.089), and pinch ( = 0.028) strengths and in forced vital capacity (2 CpGs: = 0.002 and 0.021) and maximal inspiratory pressure ( = 0.012).

CONCLUSIONS

In addition to the CTG repeat length, epivariations independently explain phenotypic variability in DM1 and could thus improve prognostic accuracy for patients.

摘要

目的

评估强直性肌营养不良蛋白激酶()DNA甲基化(DNAme)表观变异对1型强直性肌营养不良(DM1)患者肌肉和呼吸状况的影响。

方法

采用标准化测量方法评估表型。对亚硫酸氢盐处理后的DNA进行焦磷酸测序,以定量90例DM1患者(成人型)血液中的DNAme水平。使用小池PCR评估CTG重复序列的模式长度。还检测了对阿西尔敏感的变异重复序列的存在情况。

结果

CTG扩增上游(外显子和第11内含子)的DNAme水平与CTG重复序列的模式长度相关(r = -0.224,= 0.040;r = -0.317,= 0.003;r = -0.241,= 0.027),而在CTG重复序列下游观察到与表观变异的相关性(r = 0.227;= 0.037)。变异重复序列的存在与多个CpG位点较高的DNAme水平相关(高达10%;= 0.001)。逐步多元线性回归模型显示,DNAme对解释踝背屈肌(3个CpG:= 0.001、0.013和0.001)、握力(= 0.089)、捏力(= 0.028)以及用力肺活量(2个CpG:= 0.002和0.021)和最大吸气压力(= 0.012)的表型变异性有显著且独立的贡献。

结论

除了CTG重复序列长度外,表观变异独立解释了DM1的表型变异性,因此可以提高患者的预后准确性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4847/6568328/8b792799764a/NG2019010165f1.jpg

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