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迷你贵宾犬的视神经发育不全:一项初步的遗传及候选基因关联研究。

Optic nerve hypoplasia in miniature poodle dogs: A preliminary genetic and candidate gene association study.

作者信息

Becker Doreen, Niggel Jessica K, Pearce-Kelling Sue, Riis Ronald C, Aguirre Gustavo D

机构信息

Leibniz Institute for Farm Animal Biology (FBN), Institute for Genome Biology, Dummerstorf, Germany.

Section of Ophthalmology, Department of Clinical Sciences & Advanced Medicine, School of Veterinary Medicine, University of Pennsylvania, Philadelphia, PA.

出版信息

Vet Ophthalmol. 2020 Jan;23(1):67-76. doi: 10.1111/vop.12691. Epub 2019 Jul 25.

Abstract

OBJECTIVE

To conduct a genetic and candidate gene association study with samples from phenotype-ascertained dogs to identify putative disease-associated gene/mutation for optic nerve hypoplasia (ONH) in the miniature poodle.

ANIMALS STUDIED

A total of 43 miniature poodles from the United States and Europe, nine affected bilaterally with ONH, were included in the study. Pedigree information was recorded.

PROCEDURES

A pedigree including all animals studied was assembled. Twenty-one genes typically expressed in ganglion cells or that are associated with ocular malformations and have a critical function in eye and neural retina development were selected. Exons and exon-intron boundaries of eight genes were sequenced in four ONH cases and four controls. Furthermore, cases and controls were genotyped with the Illumina CanineHD BeadChip to obtain genotypes for 13 additional candidate genes for haplotype association.

RESULTS

The assembled pedigree connected all ONH-affected dogs to a possible common founder. Identified variants and haplotypes of the tested candidate genes did not segregate with the phenotype using Identity by Descent approach assuming autosomal recessive inheritance with variable but yet unknown penetrance.

CONCLUSIONS

Pedigree analysis did not reveal the inheritance pattern. There is no evidence of association of the evaluated candidate genes with ONH; therefore, the screened candidate genes can provisionally be ruled out as causally associated with the disease.

摘要

目的

对经表型确定的犬类样本进行基因和候选基因关联研究,以鉴定玩具贵宾犬视神经发育不全(ONH)的假定疾病相关基因/突变。

研究动物

共有来自美国和欧洲的43只玩具贵宾犬纳入研究,其中9只双侧患有ONH。记录了系谱信息。

方法

构建了包括所有研究动物的系谱。选择了21个通常在神经节细胞中表达、与眼部畸形相关且在眼睛和神经视网膜发育中起关键作用的基因。对4例ONH病例和4例对照的8个基因的外显子和外显子-内含子边界进行了测序。此外,使用Illumina CanineHD BeadChip对病例和对照进行基因分型,以获得另外13个候选基因的单倍型关联基因型。

结果

构建的系谱将所有受ONH影响的犬与一个可能的共同祖先联系起来。假设常染色体隐性遗传且具有可变但未知的外显率,使用基于血缘关系的方法,所测试候选基因的已鉴定变异和单倍型与表型不分离。

结论

系谱分析未揭示遗传模式。没有证据表明所评估的候选基因与ONH有关联;因此,初步可以排除所筛选的候选基因与该疾病存在因果关联。

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本文引用的文献

1
Genetic causes of optic nerve hypoplasia.
J Med Genet. 2017 Jul;54(7):441-449. doi: 10.1136/jmedgenet-2017-104626. Epub 2017 May 13.
2
IL8 gene as modifier of cystic fibrosis: unraveling the factors which influence clinical variability.
Hum Genet. 2016 Aug;135(8):881-94. doi: 10.1007/s00439-016-1684-4. Epub 2016 May 21.
3
Variants within the SP110 nuclear body protein modify risk of canine degenerative myelopathy.
Proc Natl Acad Sci U S A. 2016 May 31;113(22):E3091-100. doi: 10.1073/pnas.1600084113. Epub 2016 May 16.
4
Searching for "monogenic diabetes" in dogs using a candidate gene approach.
Canine Genet Epidemiol. 2014 Jul 7;1:8. doi: 10.1186/2052-6687-1-8. eCollection 2014.
5
High-Resolution Imaging of the Optic Nerve and Retina in Optic Nerve Hypoplasia.
Ophthalmology. 2015 Jul;122(7):1330-9. doi: 10.1016/j.ophtha.2015.03.020. Epub 2015 May 1.
6
Exclusion of eleven candidate genes for ocular melanosis in Cairn terriers.
J Negat Results Biomed. 2013 Mar 1;12:6. doi: 10.1186/1477-5751-12-6.
7
Sample size and statistical power calculation in genetic association studies.
Genomics Inform. 2012 Jun;10(2):117-22. doi: 10.5808/GI.2012.10.2.117. Epub 2012 Jun 30.
8
The syndrome of optic nerve hypoplasia.
Curr Neurol Neurosci Rep. 2008 Sep;8(5):395-403. doi: 10.1007/s11910-008-0061-7.
9
A study of candidate genes for day blindness in the standard wire haired dachshund.
BMC Vet Res. 2008 Jul 1;4:23. doi: 10.1186/1746-6148-4-23.
10
Congenital optic nerve hypoplasia in collie doge.
Cornell Vet. 1952 Jan;42(1):67-80.

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