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通过宏基因组学方法检测到的鄂霍次克海有毒赤潮物种、季节性和环境驱动因素。

Toxic HAB species from the Sea of Okhotsk detected by a metagenetic approach, seasonality and environmental drivers.

机构信息

National Research Institute of Fisheries Science, Yokohama Kanagawa, 236-8648, Japan.

AXIOHELIX Co. Ltd, Chiyoda-ku, Tokyo, 101-0024, Japan.

出版信息

Harmful Algae. 2019 Jul;87:101631. doi: 10.1016/j.hal.2019.101631. Epub 2019 Jun 18.

Abstract

During recent decades, the distribution of harmful algal bloom (HAB) species has expanded worldwide together with the increase of blooms and toxicity events. In this study, the presence of toxic HAB species in the Sea of Okhotsk was investigated based on metagenetic data collected during 6 years of weekly monitoring. Operational taxonomic units (OTUs) associated with the toxic HAB species were detected based on amplifying 18S V7-V9 and 28S D1 rRNA gene regions. In total, 43 unique OTUs associated with toxic HAB species were revealed, with 26 of those previously not reported from the Sea of Okhotsk. More OTUs belonging to dinoflagellates were detected by 18S, whereas a similar number of OTUs associated with dinoflagellates and diatoms were detected by targeting the 28S region. Species belonging to genera Alexandrium, Karenia and Karlodinium were mainly associated with OTUs under Dinophyceae, whereas Bacillariophyceae was represented by the species belonging to genus Pseudo-nitzschia. From the detected OTUs, 22 showed a clear seasonal pattern with the majority of those appearing during summer-autumn. For Alexandrium pacificum, Aureococcus anophagefferens, and Pseudo-nitzschia pungens, the seasonal pattern was detected based on both rRNA regions. Additionally, 14 OTUs were detected during all seasons and two OTUs appeared sporadically. OTUs associated with the toxic species had low relative read abundances, which together with other factors such as similar and variable morphology as well as usage of fixatives, may explain why those species have previously not been detected by light microscopy. Environmental parameters, especially water temperature, significantly (<0.05) influenced the variability in OTU relative abundances and displayed significant (<0.05) correlations with the unique OTUs. The results of this study demonstrate the usefulness of the metagenetic approach for phytoplankton monitoring, which is especially relevant for detecting toxic HAB species.

摘要

在最近几十年中,有害藻华(HAB)物种的分布范围在全球范围内扩大,同时暴发性增加和毒性事件也有所增加。在这项研究中,基于 6 年每周监测收集的宏基因组数据,调查了鄂霍次克海有毒 HAB 物种的存在情况。通过扩增 18S V7-V9 和 28S D1 rRNA 基因区域,检测到与有毒 HAB 物种相关的功能分类单元(OTU)。总共揭示了 43 个与有毒 HAB 物种相关的独特 OTU,其中 26 个以前未在鄂霍次克海报道过。通过 18S 检测到更多属于甲藻的 OTU,而通过靶向 28S 区域检测到的与甲藻和硅藻相关的 OTU数量相似。属于亚历山大藻属、卡伦藻属和卡尔多宁属的物种主要与Dinophyceae 下的 OTU 相关,而 Bacillariophyceae 则由属于 Pseudo-nitzschia 属的物种代表。在所检测到的 OTU 中,有 22 个具有明显的季节性模式,其中大多数出现在夏季至秋季。对于太平洋亚历山大藻、聚球藻属和拟菱形藻属,根据 rRNA 区域均检测到季节性模式。此外,在所有季节都检测到 14 个 OTU,有两个 OTU 偶尔出现。与有毒物种相关的 OTU 相对丰度较低,再加上其他因素,如相似和可变的形态以及固定剂的使用,可能解释了为什么以前没有通过光镜检测到这些物种。环境参数,尤其是水温,对 OTU 相对丰度的变异性有显著影响(<0.05),并与独特 OTU 显示出显著相关性(<0.05)。这项研究的结果表明,宏基因组学方法在浮游植物监测中非常有用,特别是对于检测有毒 HAB 物种。

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