• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

朊病毒形成蛋白及朊病毒样蛋白中朊病毒样组成和序列的保守性 。 (你提供的原文似乎不完整,最后的“of.”后面缺少具体内容)

Conservation of Prion-Like Composition and Sequence in Prion-Formers and Prion-Like Proteins of .

作者信息

Su Ting-Yi, Harrison Paul M

机构信息

Department of Biology, McGill University, Montreal, QC, Canada.

出版信息

Front Mol Biosci. 2019 Jul 11;6:54. doi: 10.3389/fmolb.2019.00054. eCollection 2019.

DOI:10.3389/fmolb.2019.00054
PMID:31355208
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6639077/
Abstract

Prions in eukaryotes have been linked to diseases, evolutionary capacitance, large-scale genetic control, and long-term memory formation. Prion formation and propagation have been studied extensively in the budding yeast . Here, we have analysed the conservation of sequence and of prion-like composition for prion-forming proteins and for other prion-like proteins from , across three evolutionary levels. We discover that prion-like status is well-conserved for about half the set of prion-formers at the level, and that prion-forming domains evolve more quickly as sequences than other prion-like domains do. Such increased mutation rates may be linked to the acquisition of functional roles for prion-forming domains during the evolutionary epoch of . Domain scores for prion-like composition in are strongly correlated with scores for such composition weighted evolutionarily over the dozens of fungal species examined, indicating conservation of such prion-like status. Examples of notable prion-like proteins that are highly conserved both in sequence and prion-like composition are discussed.

摘要

真核生物中的朊病毒与疾病、进化容量、大规模基因控制和长期记忆形成有关。朊病毒的形成和传播已在芽殖酵母中得到广泛研究。在这里,我们分析了三个进化水平上形成朊病毒的蛋白质以及其他朊病毒样蛋白质的序列保守性和朊病毒样组成。我们发现,在 水平上,约一半的朊病毒形成蛋白的朊病毒样状态保守性良好,并且与其他朊病毒样结构域相比,朊病毒形成结构域的序列进化更快。这种增加的突变率可能与 在进化时期朊病毒形成结构域功能作用的获得有关。 中朊病毒样组成的结构域得分与在所研究的数十种真菌物种中经进化加权的此类组成得分高度相关,表明这种朊病毒样状态的保守性。文中讨论了在序列和朊病毒样组成上都高度保守的显著朊病毒样蛋白质的例子。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/60c4/6639077/77b877d0aa4e/fmolb-06-00054-g0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/60c4/6639077/8cf8c269ceda/fmolb-06-00054-g0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/60c4/6639077/76dfe54d2ec5/fmolb-06-00054-g0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/60c4/6639077/77b877d0aa4e/fmolb-06-00054-g0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/60c4/6639077/8cf8c269ceda/fmolb-06-00054-g0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/60c4/6639077/76dfe54d2ec5/fmolb-06-00054-g0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/60c4/6639077/77b877d0aa4e/fmolb-06-00054-g0003.jpg

相似文献

1
Conservation of Prion-Like Composition and Sequence in Prion-Formers and Prion-Like Proteins of .朊病毒形成蛋白及朊病毒样蛋白中朊病毒样组成和序列的保守性 。 (你提供的原文似乎不完整,最后的“of.”后面缺少具体内容)
Front Mol Biosci. 2019 Jul 11;6:54. doi: 10.3389/fmolb.2019.00054. eCollection 2019.
2
Emergence and evolution of yeast prion and prion-like proteins.酵母朊病毒和类朊病毒蛋白的出现与进化。
BMC Evol Biol. 2016 Jan 25;16:24. doi: 10.1186/s12862-016-0594-3.
3
Variable absorption of mutational trends by prion-forming domains during evolution.在进化过程中,朊病毒形成结构域对突变趋势的可变吸收。
PeerJ. 2020 Aug 6;8:e9669. doi: 10.7717/peerj.9669. eCollection 2020.
4
Evolution of budding yeast prion-determinant sequences across diverse fungi.不同真菌中出芽酵母朊病毒决定簇序列的进化
J Mol Biol. 2007 Apr 20;368(1):273-82. doi: 10.1016/j.jmb.2007.01.070. Epub 2007 Feb 3.
5
Evolutionary conservation of prion-forming abilities of the yeast Sup35 protein.酵母 Sup35 蛋白形成朊病毒能力的进化保守性。
Mol Microbiol. 2000 Feb;35(4):865-76. doi: 10.1046/j.1365-2958.2000.01761.x.
6
The evolutionary scope and neurological disease linkage of yeast-prion-like proteins in humans.人类中酵母朊病毒样蛋白的进化范围与神经疾病关联
Biol Direct. 2016 Jul 26;11:32. doi: 10.1186/s13062-016-0134-5.
7
Deep conservation of prion-like composition in the eukaryotic prion-former Pub1/Tia1 family and its relatives.真核生物中朊病毒样前体Pub1/Tia1家族及其相关蛋白的朊病毒样组成的深度保守性。
PeerJ. 2020 Apr 17;8:e9023. doi: 10.7717/peerj.9023. eCollection 2020.
8
Evolutionary behaviour of bacterial prion-like proteins.细菌朊病毒样蛋白的进化行为。
PLoS One. 2019 Mar 5;14(3):e0213030. doi: 10.1371/journal.pone.0213030. eCollection 2019.
9
The effects of glutamine/asparagine content on aggregation and heterologous prion induction by yeast prion-like domains.谷氨酰胺/天冬酰胺含量对酵母朊病毒样结构域的聚集及异源朊病毒诱导的影响
Prion. 2017 Jul 4;11(4):249-264. doi: 10.1080/19336896.2017.1344806. Epub 2017 Jun 30.
10
Controlling the prion propensity of glutamine/asparagine-rich proteins.控制富含谷氨酰胺/天冬酰胺蛋白质的朊病毒倾向。
Prion. 2015;9(5):347-54. doi: 10.1080/19336896.2015.1111506.

引用本文的文献

1
Intrinsically Disordered Compositional Bias in Proteins: Sequence Traits, Region Clustering, and Generation of Hypothetical Functional Associations.蛋白质中内在无序的组成偏向性:序列特征、区域聚类及假设功能关联的生成
Bioinform Biol Insights. 2024 Oct 15;18:11779322241287485. doi: 10.1177/11779322241287485. eCollection 2024.
2
Optimizing strategy for the discovery of compositionally-biased or low-complexity regions in proteins.优化发现蛋白质中组成偏向或低复杂度区域的策略。
Sci Rep. 2024 Jan 5;14(1):680. doi: 10.1038/s41598-023-50991-8.
3
Evolution of sequence traits of prion-like proteins linked to amyotrophic lateral sclerosis (ALS).

本文引用的文献

1
Evolutionary behaviour of bacterial prion-like proteins.细菌朊病毒样蛋白的进化行为。
PLoS One. 2019 Mar 5;14(3):e0213030. doi: 10.1371/journal.pone.0213030. eCollection 2019.
2
Compositionally Biased Dark Matter in the Protein Universe.蛋白质宇宙中的成分偏向暗物质。
Proteomics. 2018 Nov;18(21-22):e1800069. doi: 10.1002/pmic.201800069. Epub 2018 Oct 29.
3
Discovering Putative Prion-Like Proteins in : A Computational and Experimental Analysis.在……中发现假定的类朊病毒蛋白:一项计算与实验分析
与肌萎缩侧索硬化症(ALS)相关的朊病毒样蛋白序列特征的演变。
PeerJ. 2022 Nov 17;10:e14417. doi: 10.7717/peerj.14417. eCollection 2022.
4
fLPS 2.0: rapid annotation of compositionally-biased regions in biological sequences.fLPS 2.0:生物序列中组成性偏向区域的快速注释
PeerJ. 2021 Oct 28;9:e12363. doi: 10.7717/peerj.12363. eCollection 2021.
5
The relationship between protein domains and homopeptides in the proteome.蛋白质组中蛋白质结构域与同型肽之间的关系。
PeerJ. 2020 Oct 2;8:e9940. doi: 10.7717/peerj.9940. eCollection 2020.
6
Variable absorption of mutational trends by prion-forming domains during evolution.在进化过程中,朊病毒形成结构域对突变趋势的可变吸收。
PeerJ. 2020 Aug 6;8:e9669. doi: 10.7717/peerj.9669. eCollection 2020.
7
Deep conservation of prion-like composition in the eukaryotic prion-former Pub1/Tia1 family and its relatives.真核生物中朊病毒样前体Pub1/Tia1家族及其相关蛋白的朊病毒样组成的深度保守性。
PeerJ. 2020 Apr 17;8:e9023. doi: 10.7717/peerj.9023. eCollection 2020.
Front Microbiol. 2018 Aug 7;9:1737. doi: 10.3389/fmicb.2018.01737. eCollection 2018.
4
Discerning evolutionary trends in post-translational modification and the effect of intrinsic disorder: Analysis of methylation, acetylation and ubiquitination sites in human proteins.辨别翻译后修饰和内在无序性的进化趋势:人类蛋白质中甲基化、乙酰化和泛素化位点的分析。
PLoS Comput Biol. 2018 Aug 10;14(8):e1006349. doi: 10.1371/journal.pcbi.1006349. eCollection 2018 Aug.
5
Prion-like Domains in Eukaryotic Viruses.真核病毒中的朊病毒样结构域。
Sci Rep. 2018 Jun 12;8(1):8931. doi: 10.1038/s41598-018-27256-w.
6
Addressing Intracellular Amyloidosis in Bacteria with RepA-WH1, a Prion-Like Protein.利用类朊病毒蛋白RepA-WH1解决细菌中的细胞内淀粉样变性问题。
Methods Mol Biol. 2018;1779:289-312. doi: 10.1007/978-1-4939-7816-8_18.
7
Phase separation of a yeast prion protein promotes cellular fitness.酵母朊病毒蛋白的液-液相分离促进细胞适应度。
Science. 2018 Jan 5;359(6371). doi: 10.1126/science.aao5654.
8
Prion-Like Domains in Phagobiota.吞噬生物群中的类朊病毒结构域
Front Microbiol. 2017 Nov 15;8:2239. doi: 10.3389/fmicb.2017.02239. eCollection 2017.
9
fLPS: Fast discovery of compositional biases for the protein universe.fLPS:蛋白质宇宙组成偏差的快速发现
BMC Bioinformatics. 2017 Nov 13;18(1):476. doi: 10.1186/s12859-017-1906-3.
10
Manipulating the aggregation activity of human prion-like proteins.调控人类朊病毒样蛋白的聚集活性。
Prion. 2017 Sep 3;11(5):323-331. doi: 10.1080/19336896.2017.1356560.