• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

revtools:一个支持证据综合文章筛选的 R 包。

revtools: An R package to support article screening for evidence synthesis.

机构信息

Fenner School of Environment & Society, The Australian National University, Acton, ACT, Australia.

出版信息

Res Synth Methods. 2019 Dec;10(4):606-614. doi: 10.1002/jrsm.1374. Epub 2019 Oct 18.

DOI:10.1002/jrsm.1374
PMID:31355546
Abstract

The field of evidence synthesis is growing rapidly, with a corresponding increase in the number of software tools and workflows to support the construction of systematic reviews, systematic maps, and meta-analyses. Despite much progress, however, a number of problems remain, including slow integration of new statistical or methodological approaches into user-friendly software, low prevalence of open-source software, and poor integration among distinct software tools. These issues hinder the utility and transparency of new methods to the research community. Here, I present revtools, an R package to support article screening during evidence synthesis projects. It provides tools for the import and deduplication of bibliographic data, screening of articles by title or abstract, and visualization of article content using topic models. The software is entirely open-source and combines command-line scripting for experienced programmers with custom-built user interfaces for casual users, with further methods to support article screening to be added over time. revtools provides free access to novel methods in an open-source environment and represents a valuable step in expanding the capacity of R to support evidence synthesis projects.

摘要

证据综合领域发展迅速,支持系统评价、系统图谱和荟萃分析构建的软件工具和工作流程数量也相应增加。然而,尽管取得了许多进展,但仍存在一些问题,包括新的统计或方法学方法难以集成到用户友好的软件中、开源软件的普及度低以及不同软件工具之间的集成度差。这些问题阻碍了新方法在研究界的实用性和透明度。在这里,我介绍了 revtools,这是一个支持证据综合项目文章筛选的 R 包。它提供了用于导入和去重书目数据、按标题或摘要筛选文章以及使用主题模型可视化文章内容的工具。该软件完全开源,为有经验的程序员提供了命令行脚本,为普通用户提供了自定义用户界面,随着时间的推移,还将添加更多支持文章筛选的方法。revtools 在开源环境中提供了对新方法的免费访问,这是扩展 R 支持证据综合项目能力的重要一步。

相似文献

1
revtools: An R package to support article screening for evidence synthesis.revtools:一个支持证据综合文章筛选的 R 包。
Res Synth Methods. 2019 Dec;10(4):606-614. doi: 10.1002/jrsm.1374. Epub 2019 Oct 18.
2
Less is less: a systematic review of graph use in meta-analyses.少即是少:元分析中图形使用的系统评价。
Res Synth Methods. 2013 Sep;4(3):209-19. doi: 10.1002/jrsm.1076. Epub 2013 Feb 22.
3
ScreenSifter: analysis and visualization of RNAi screening data.ScreenSifter:RNAi 筛选数据的分析和可视化。
BMC Bioinformatics. 2013 Oct 3;14:290. doi: 10.1186/1471-2105-14-290.
4
Systematically evaluating interfaces for RNA-seq analysis from a life scientist perspective.从生命科学家的角度系统地评估 RNA-seq 分析的接口。
Brief Bioinform. 2016 Mar;17(2):213-23. doi: 10.1093/bib/bbv036. Epub 2015 Jun 23.
5
RLetters: A Web-Based Application for Text Analysis of Journal Articles.RLetters:一个用于期刊文章文本分析的基于网络的应用程序。
PLoS One. 2016 Jan 5;11(1):e0146004. doi: 10.1371/journal.pone.0146004. eCollection 2016.
6
Development of an information retrieval tool for biomedical patents.生物医学专利信息检索工具的开发。
Comput Methods Programs Biomed. 2018 Jun;159:125-134. doi: 10.1016/j.cmpb.2018.03.012. Epub 2018 Mar 14.
7
Automated Comparative Metabolite Profiling of Large LC-ESIMS Data Sets in an ACD/MS Workbook Suite Add-in, and Data Clustering on a New Open-Source Web Platform FreeClust.基于 ACD/MS Workbook Suite 插件的大型 LC-ESIMS 数据集自动化比较代谢物分析,以及在新开源 Web 平台 FreeClust 上进行数据聚类。
Anal Chem. 2017 Dec 5;89(23):12682-12689. doi: 10.1021/acs.analchem.7b02221. Epub 2017 Nov 15.
8
ManyVis: multiple applications in an integrated visualization environment.ManyVis:集成可视化环境中的多个应用程序。
IEEE Trans Vis Comput Graph. 2013 Dec;19(12):2878-85. doi: 10.1109/TVCG.2013.174.
9
Getting more out of biomedical documents with GATE's full lifecycle open source text analytics.利用 GATE 的全生命周期开源文本分析技术,从生物医学文档中获取更多信息。
PLoS Comput Biol. 2013;9(2):e1002854. doi: 10.1371/journal.pcbi.1002854. Epub 2013 Feb 7.
10
A service-based BLAST command tool supported by cloud infrastructures.一种由云基础设施支持的基于服务的BLAST命令工具。
Stud Health Technol Inform. 2012;175:69-77.

引用本文的文献

1
Global thermal tolerance compilation for freshwater invertebrates and fish.淡水无脊椎动物和鱼类的全球热耐受性汇编
Sci Data. 2025 Aug 26;12(1):1488. doi: 10.1038/s41597-025-05832-w.
2
Parasite community of the pelagic thresher Alopias pelagicus (Lamniformes) as additional indicator of trophic network status and functioning.远洋长尾鲨(Alopias pelagicus,鼠鲨目)的寄生虫群落作为营养网络状态和功能的额外指标
Sci Rep. 2025 Jul 21;15(1):26473. doi: 10.1038/s41598-025-11572-z.
3
Atypical Use of Visuospatial Context in Psychotic Psychopathology: A Meta-analysis.
精神分裂症精神病理学中视觉空间背景的非典型使用:一项荟萃分析。
Schizophr Bull. 2025 Jul 7;51(4):983-996. doi: 10.1093/schbul/sbae081.
4
Effectiveness of perches in promoting bird-mediated seed dispersal for natural forest regeneration: a systematic review.栖木在促进鸟类介导的种子传播以实现天然林更新方面的有效性:一项系统综述
Environ Evid. 2025 Jun 14;14(1):10. doi: 10.1186/s13750-025-00363-8.
5
A scoping review of tropical pioneer trees' roles for restoration and conservation management: (Hypericaceae) a widespread African species as a model.热带先锋树种在恢复和保护管理中的作用的范围综述:以一种广泛分布于非洲的金丝桃科植物为例
PeerJ. 2025 May 23;13:e19458. doi: 10.7717/peerj.19458. eCollection 2025.
6
30 years of climate related phenological research: themes and trends.30年的气候相关物候学研究:主题与趋势
Int J Biometeorol. 2025 Jun;69(6):1459-1473. doi: 10.1007/s00484-025-02903-w. Epub 2025 May 12.
7
The influence of changing fire regimes on specialized plant-animal interactions.火灾模式变化对特定动植物相互作用的影响。
Philos Trans R Soc Lond B Biol Sci. 2025 Apr;380(1924):20230448. doi: 10.1098/rstb.2023.0448. Epub 2025 Apr 17.
8
Experimental reporting of fish transcriptomic responses in environmental toxicology and ecotoxicology.环境毒理学和生态毒理学中鱼类转录组反应的实验报告
Environ Toxicol Chem. 2025 Sep 1;44(9):2580-2598. doi: 10.1093/etojnl/vgae077.
9
Indirect genetic effects increase the heritable variation available to selection and are largest for behaviors: a meta-analysis.间接遗传效应增加了可供选择的遗传变异,并且在行为方面最为显著:一项荟萃分析。
Evol Lett. 2024 Oct 10;9(1):89-104. doi: 10.1093/evlett/qrae051. eCollection 2025 Feb.
10
Global meta-analysis shows action is needed to halt genetic diversity loss.全球荟萃分析表明,需要采取行动来阻止遗传多样性丧失。
Nature. 2025 Feb;638(8051):704-710. doi: 10.1038/s41586-024-08458-x. Epub 2025 Jan 29.