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外周血单核细胞基因表达模式及功能通路研究揭示牙周炎外科治疗的潜在分子机制。

Study on gene expression patterns and functional pathways of peripheral blood monocytes reveals potential molecular mechanism of surgical treatment for periodontitis.

作者信息

Ma Jin-Ji, Liu Hong-Mei, Xu Xiang-Hua, Guo Li-Xin, Lin Qing

机构信息

Jinan Stomatological Hospital Gaoxin Branch, Jinan 250001, Shandong Province, China.

Department of Endodontics, Jinan Stomatological Hospital, Jinan 250001, Shandong Province, China.

出版信息

World J Clin Cases. 2019 Jun 26;7(12):1383-1392. doi: 10.12998/wjcc.v7.i12.1383.

Abstract

BACKGROUND

Periodontitis is a chronic inflammation of periodontal supporting tissue caused by local factors. Periodontal surgery can change the gene expression of peripheral blood mononuclear cells. However, little is known about the potential mechanism of surgical treatment for periodontitis.

AIM

To explore the potential molecular mechanism of surgical treatment for periodontitis.

METHODS

First, based on the expression profiles of genes related to surgical treatment for periodontitis, a set of expression disorder modules related to surgical treatment for periodontitis were obtained by enrichment analysis. Subsequently, based on crosstalk analysis, we proved that there was a significant crosstalk relationship between module 3 and module 5. Finally, based on predictive analysis of multidimensional regulators, we identified a series of regulatory factors, such as endogenous genes, non-coding RNAs (ncRNAs), and transcription factors, which have potential regulatory effects on periodontitis.

RESULTS

A total of 337 genes related to surgical treatment for periodontitis were obtained, and 3896 genes related to periodontitis were amplified. Eight expression modules of periodontitis were obtained, involving the aggregation of 2672 gene modules. These modules are mainly involved in G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger, and adenylate cyclase-modulating G-protein coupled receptor signaling pathway. In addition, eight endogenous genes (including , , and ) were screened by network connectivity analysis. Finally, based on this set of potential dysfunction modules, 94 transcription factors (including NFKB1, SP1, and STAT3) and 1198 ncRNAs (including MALAT1, CRNDE, and ANCR) were revealed. These core regulators are thought to be involved in the potential molecular mechanism of periodontitis after surgical treatment.

CONCLUSION

Based on the results of this study, we can show biologists and pharmacists a new idea to reveal the potential molecular mechanism of surgical treatment for periodontitis, and provide valuable reference for follow-up treatment programs.

摘要

背景

牙周炎是由局部因素引起的牙周支持组织的慢性炎症。牙周手术可改变外周血单核细胞的基因表达。然而,关于牙周炎手术治疗的潜在机制知之甚少。

目的

探讨牙周炎手术治疗的潜在分子机制。

方法

首先,基于牙周炎手术治疗相关基因的表达谱,通过富集分析获得一组与牙周炎手术治疗相关的表达紊乱模块。随后,基于相互作用分析,我们证明模块3和模块5之间存在显著的相互作用关系。最后,基于多维调节因子的预测分析,我们鉴定出一系列对牙周炎具有潜在调节作用的调节因子,如内源基因、非编码RNA(ncRNA)和转录因子。

结果

共获得337个与牙周炎手术治疗相关的基因,并扩增出3896个与牙周炎相关的基因。获得了8个牙周炎表达模块,涉及2672个基因模块的聚集。这些模块主要参与G蛋白偶联受体信号通路、与环核苷酸第二信使偶联以及腺苷酸环化酶调节的G蛋白偶联受体信号通路。此外,通过网络连通性分析筛选出8个内源基因(包括 、 和 )。最后,基于这组潜在的功能失调模块,揭示了94个转录因子(包括NFKB1、SP1和STAT3)和1198个ncRNA(包括MALAT1、CRNDE和ANCR)。这些核心调节因子被认为参与了牙周炎手术治疗后的潜在分子机制。

结论

基于本研究结果,我们可以向生物学家和药剂师展示一种新的思路,以揭示牙周炎手术治疗的潜在分子机制,并为后续治疗方案提供有价值的参考。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9270/6656668/50cd3efb0e31/WJCC-7-1383-g001.jpg

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