John P. Hussman Institute for Human Genomics, Miller School of Medicine, University of Miami, Miami, FL, USA/The Dr. John T. Macdonald Foundation Department of Human Genetics, Miller School of Medicine, University of Miami, Miami, FL, USA.
Department of Neurology, Keck School of Medicine, University of Southern California, Los Angeles, CA, USA.
Mult Scler. 2020 Oct;26(11):1329-1339. doi: 10.1177/1352458519863764. Epub 2019 Aug 1.
Substantial progress has been made toward unraveling the genetic architecture of multiple sclerosis (MS) within populations of European ancestry, but few genetic studies have focused on Hispanic and African American populations within the United States.
We sought to test the relevance of common European MS risk variants outside of the major histocompatibility complex ( = 200) within these populations.
Genotype data were available on 2652 Hispanics (1298 with MS, 1354 controls) and 2435 African Americans (1298 with MS, 1137 controls). We conducted single variant, pathway, and cumulative genetic risk score analyses.
We found less replication than statistical power suggested, particularly among African Americans. This could be due to limited correlation between the tested and causal variants within the sample or alternatively could indicate allelic and locus heterogeneity. Differences were observed between pathways enriched among the replicating versus all 200 variants. Although these differences should be examined in larger samples, a potential role exists for gene-environment or gene-gene interactions which alter phenotype differentially across racial and ethnic groups. Cumulative genetic risk scores were associated with MS within each study sample but showed limited diagnostic capability.
These findings provide a framework for fine-mapping efforts in multi-ethnic populations of MS.
在欧洲血统人群中,对多发性硬化症(MS)的遗传结构已经取得了很大的进展,但很少有遗传研究关注美国的西班牙裔和非裔美国人。
我们试图在这些人群中检验常见的欧洲 MS 风险变异在主要组织相容性复合体(MHC)之外的相关性。
对 2652 名西班牙裔(1298 名 MS 患者,1354 名对照者)和 2435 名非裔美国人(1298 名 MS 患者,1137 名对照者)进行了基因型数据分析。我们进行了单变体、途径和累积遗传风险评分分析。
我们发现的复制结果比统计能力所提示的要少,尤其是在非裔美国人中。这可能是由于在样本中测试的和因果变异之间的相关性有限,或者可能表明等位基因和基因座的异质性。在复制的通路与所有 200 个变异体之间存在差异。虽然这些差异应该在更大的样本中进行检验,但基因-环境或基因-基因相互作用的潜在作用可能存在,这些作用会在不同种族和族裔群体中以不同的方式改变表型。累积遗传风险评分与每个研究样本中的 MS 相关,但显示出有限的诊断能力。
这些发现为 MS 的多民族人群中的精细映射工作提供了框架。