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自抑制基因精确解中 so(2, 1) 对称的物理意义。

Physical implications of so(2, 1) symmetry in exact solutions for a self-repressing gene.

机构信息

Escola de Artes, Ciências e Humanidades, Núcleo de Estudos Interdisciplinares em Sistemas Complexos, Departamento de Radiologia - Faculdade de Medicina, Universidade de São Paulo - Instituto do Câncer do Estado de São Paulo - Av. Arlindo Béttio, 1000 CEP 03828-000, São Paulo, SP, Brazil.

Departments of Statistics, Ecology and Evolution, Molecular Genetics and Cell Biology, Jones Laboratory, University of Chicago, 5747 South Ellis Ave., Chicago, Illinois 60637, USA.

出版信息

J Chem Phys. 2019 Jul 28;151(4):041101. doi: 10.1063/1.5105361.

Abstract

We chemically characterize the symmetries underlying the exact solutions of a stochastic negatively self-regulating gene. The breaking of symmetry at a low molecular number causes three effects. Two branches of the solution exist, having high and low switching rates, such that the low switching rate branch approaches deterministic behavior and the high switching rate branch exhibits sub-Fano behavior. The average protein number differs from the deterministically expected value. Bimodal probability distributions appear as the protein number becomes a readout of the ON/OFF state of the gene.

摘要

我们对随机负自我调节基因的精确解所基于的对称性进行了化学表征。在低分子数下的对称性破缺会产生三种效应。存在两个分支的解决方案,具有高和低的开关率,使得低开关率分支接近确定性行为,而高开关率分支表现出亚范诺行为。平均蛋白质数量与确定性预期值不同。当蛋白质数量成为基因的 ON/OFF 状态的读数时,双峰概率分布出现。

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本文引用的文献

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Gene regulation and noise reduction by coupling of stochastic processes.通过随机过程耦合实现基因调控与降噪
Phys Rev E Stat Nonlin Soft Matter Phys. 2015 Feb;91(2):020701. doi: 10.1103/PhysRevE.91.020701. Epub 2015 Feb 26.
2
Mixed Poisson distributions in exact solutions of stochastic autoregulation models.随机自调节模型精确解中的混合泊松分布
Phys Rev E Stat Nonlin Soft Matter Phys. 2014 Nov;90(5-1):052712. doi: 10.1103/PhysRevE.90.052712. Epub 2014 Nov 13.
3
Exact time-dependent solutions for a self-regulating gene.一个自我调节基因的精确时间相关解。
Phys Rev E Stat Nonlin Soft Matter Phys. 2011 Jun;83(6 Pt 1):062902. doi: 10.1103/PhysRevE.83.062902. Epub 2011 Jun 27.
6
Symmetry and stochastic gene regulation.对称性与随机基因调控。
Phys Rev Lett. 2007 Sep 7;99(10):108103. doi: 10.1103/PhysRevLett.99.108103.
7
Modeling stochastic gene expression under repression.抑制条件下的随机基因表达建模
J Math Biol. 2007 Sep;55(3):413-31. doi: 10.1007/s00285-007-0090-x. Epub 2007 May 22.
8
Self-regulating gene: an exact solution.自我调节基因:一个精确的解决方案。
Phys Rev E Stat Nonlin Soft Matter Phys. 2005 Nov;72(5 Pt 1):051907. doi: 10.1103/PhysRevE.72.051907. Epub 2005 Nov 4.
9
Algebraic model for the evolution of the genetic code.遗传密码进化的代数模型。
Phys Rev Lett. 1993 Dec 27;71(26):4401-4404. doi: 10.1103/PhysRevLett.71.4401.

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