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从黄瓜()根部分离得到的挥发性生防细菌GSE09菌株的全基因组序列数据。

Complete genome sequence data of strain GSE09, a volatile-producing biocontrol bacterium isolated from cucumber () root.

作者信息

Jeong Jin-Ju, Sajidah Siti, Oh Ji Yeon, Sang Mee Kyung, Kim Kyoung-Su, Kim Ki Deok

机构信息

Laboratory of Plant Disease and Biocontrol, Department of Biosystems and Biotechnology, Korea University, Seoul, South Korea.

Division of Agricultural Microbiology, National Academy of Agricultural Science, Rural Development Administration, Wanju, South Korea.

出版信息

Data Brief. 2019 Jul 15;25:104270. doi: 10.1016/j.dib.2019.104270. eCollection 2019 Aug.

Abstract

(previously identified as ) strain GSE09 is a volatile-producing bacterium that exhibits significant biocontrol activity against an oomycete pathogen, , on pepper plants. Here, we report the complete genome sequence data of strain GSE09, isolated from surface-sterilized cucumber root. The genome consists of a circular 5,109,718-bp chromosome with a G + C content of 34.30%. A total of 4,138 complete coding sequences including 15 rRNA, 66 tRNA, 3 ncRNA, and 51 pseudogene sequences were retrieved. Thus, the genome sequence data of GSE09 may facilitate the elucidation of many biological traits related to the biocontrol against plant pathogens.

摘要

(先前鉴定为)GSE09菌株是一种能产生挥发性物质的细菌,对辣椒植株上的一种卵菌病原体——辣椒疫霉表现出显著的生物防治活性。在此,我们报告了从表面消毒的黄瓜根中分离出的GSE09菌株的完整基因组序列数据。该基因组由一个环状的5,109,718碱基对染色体组成,G + C含量为34.30%。共检索到4,138个完整的编码序列,包括15个rRNA、66个tRNA、3个非编码RNA和51个假基因序列。因此,GSE09菌株的基因组序列数据可能有助于阐明许多与防治植物病原体相关的生物学特性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2c81/6676235/4260bbc0a41d/gr1.jpg

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