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1
Electron-transfer studies involving flavodoxin and a natural redox partner, the iron protein of nitrogenase. Conformational constraints on protein-protein interactions and the kinetics of electron transfer within the protein complex.涉及黄素氧还蛋白和一种天然氧化还原伴侣——固氮酶铁蛋白的电子转移研究。蛋白质 - 蛋白质相互作用的构象限制以及蛋白质复合物内电子转移的动力学。
Biochem J. 1988 Jul 15;253(2):587-95. doi: 10.1042/bj2530587.
2
Nitrogenase of Klebsiella pneumoniae. Kinetic studies on the Fe protein involving reduction by sodium dithionite, the binding of MgADP and a conformation change that alters the reactivity of the 4Fe-4S centre.肺炎克雷伯菌的固氮酶。关于铁蛋白的动力学研究,涉及连二亚硫酸钠还原、MgADP结合以及改变4Fe-4S中心反应性的构象变化。
Biochem J. 1987 Sep 1;246(2):455-65. doi: 10.1042/bj2460455.
3
Nitrogenase of Klebsiella pneumoniae. Kinetics of the dissociation of oxidized iron protein from molybdenum-iron protein: identification of the rate-limiting step for substrate reduction.肺炎克雷伯菌的固氮酶。氧化态铁蛋白与钼铁蛋白解离的动力学:底物还原限速步骤的鉴定。
Biochem J. 1983 Nov 1;215(2):393-403. doi: 10.1042/bj2150393.
4
Electron transfer to nitrogenase. Characterization of flavodoxin from Azotobacter chroococcum and comparison of its redox potentials with those of flavodoxins from Azotobacter vinelandii and Klebsiella pneumoniae (nifF-gene product).电子向固氮酶的转移。褐球固氮菌黄素氧还蛋白的特性及其氧化还原电位与棕色固氮菌和肺炎克雷伯氏菌(nifF基因产物)黄素氧还蛋白氧化还原电位的比较。
Biochem J. 1986 Oct 1;239(1):69-75. doi: 10.1042/bj2390069.
5
MgATP-independent hydrogen evolution catalysed by nitrogenase: an explanation for the missing electron(s) in the MgADP-AlF4 transition-state complex.固氮酶催化的不依赖MgATP的析氢反应:对MgADP-AlF4过渡态复合物中缺失电子的解释
Biochem J. 1999 May 1;339 ( Pt 3)(Pt 3):511-5.
6
Evidence for electron transfer from the nitrogenase iron protein to the molybdenum-iron protein without MgATP hydrolysis: characterization of a tight protein-protein complex.在不水解MgATP的情况下,固氮酶铁蛋白向钼铁蛋白进行电子转移的证据:一种紧密蛋白质-蛋白质复合物的特性
Biochemistry. 1996 Jun 4;35(22):7188-96. doi: 10.1021/bi9603985.
7
Nitrogenase of Azotobacter vinelandii: kinetic analysis of the Fe protein redox cycle.维涅兰德固氮菌的固氮酶:铁蛋白氧化还原循环的动力学分析
Biochemistry. 1998 Dec 15;37(50):17345-54. doi: 10.1021/bi981509y.
8
The vanadium- and molybdenum-containing nitrogenases of Azotobacter chroococcum. Comparison of mid-point potentials and kinetics of reduction by sodium dithionite of the iron proteins with bound magnesium adenosine 5'-diphosphate.褐球固氮菌中含钒和钼的固氮酶。结合镁腺苷5'-二磷酸的铁蛋白的中点电位及连二亚硫酸钠还原动力学的比较。
Biochem J. 1988 Apr 1;251(1):165-9. doi: 10.1042/bj2510165.
9
Vanadium nitrogenase of Azotobacter chroococcum. MgATP-dependent electron transfer within the protein complex.褐球固氮菌的钒固氮酶。蛋白质复合物内依赖MgATP的电子转移。
Biochem J. 1989 Feb 1;257(3):789-94. doi: 10.1042/bj2570789.
10
Kinetics of nitrogenase of Klebsiella pneumoniae. Heterotropic interactions between magnesium-adenosine 5'-diphosphate and magnesium-adenosine 5'-triphosphate.肺炎克雷伯菌固氮酶的动力学。镁 - 腺苷5'-二磷酸与镁 - 腺苷5'-三磷酸之间的异促相互作用。
Biochem J. 1977 Aug 1;165(2):255-62. doi: 10.1042/bj1650255.

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Nitrogenase Fe Protein: A Multi-Tasking Player in Substrate Reduction and Metallocluster Assembly.固氮酶 Fe 蛋白:在底物还原和金属簇组装中的多面手。
Molecules. 2022 Oct 10;27(19):6743. doi: 10.3390/molecules27196743.
3
Second and Outer Coordination Sphere Effects in Nitrogenase, Hydrogenase, Formate Dehydrogenase, and CO Dehydrogenase.二配位和外配位球效应对氮酶、氢化酶、甲酸脱氢酶和一氧化碳脱氢酶的影响。
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Reactivity, Mechanism, and Assembly of the Alternative Nitrogenases.交替固氮酶的反应性、机制和组装。
Chem Rev. 2020 Jun 24;120(12):5107-5157. doi: 10.1021/acs.chemrev.9b00704. Epub 2020 Mar 4.
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Electron Transfer in Nitrogenase.氮酶中的电子转移。
Chem Rev. 2020 Jun 24;120(12):5158-5193. doi: 10.1021/acs.chemrev.9b00663. Epub 2020 Jan 30.
6
Unraveling the interactions of the physiological reductant flavodoxin with the different conformations of the Fe protein in the nitrogenase cycle.解析生理还原剂黄素氧还蛋白在固氮酶循环中与铁蛋白不同构象的相互作用。
J Biol Chem. 2017 Sep 22;292(38):15661-15669. doi: 10.1074/jbc.M117.801548. Epub 2017 Aug 7.
7
Electrochemical and structural characterization of Azotobacter vinelandii flavodoxin II.棕色固氮菌黄素氧还蛋白II的电化学与结构表征
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The Electron Bifurcating FixABCX Protein Complex from Azotobacter vinelandii: Generation of Low-Potential Reducing Equivalents for Nitrogenase Catalysis.来自棕色固氮菌的电子分叉FixABCX蛋白复合物:为固氮酶催化产生低电位还原当量
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9
Characterization of a modified nitrogenase Fe protein from Klebsiella pneumoniae in which the 4Fe4S cluster has been replaced by a 4Fe4Se cluster.肺炎克雷伯菌中一种修饰的固氮酶铁蛋白的表征,其中4Fe4S簇已被4Fe4Se簇取代。
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10
Flavodoxin hydroquinone reduces Azotobacter vinelandii Fe protein to the all-ferrous redox state with a S = 0 spin state.黄素氧还蛋白对苯二酚将棕色固氮菌铁蛋白还原为具有S = 0自旋态的全亚铁氧化还原状态。
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本文引用的文献

1
Electron transport to nitrogenase in Azotobacter chroococcum: Azotobacter flavodoxin hydroquinone as an electron donor.棕色固氮菌中电子向固氮酶的传递:棕色固氮菌黄素氧还蛋白对苯二酚作为电子供体。
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Electron transport to nitrogenase in Klebsiella pneumoniae.肺炎克雷伯菌中电子向固氮酶的传递。
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3
Roles of nifF and nifJ gene products in electron transport to nitrogenase in Klebsiella pneumoniae.肺炎克雷伯菌中nifF和nifJ基因产物在向固氮酶进行电子传递中的作用。
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4
Role of magnesium adenosine 5'-triphosphate in the hydrogen evolution reaction catalyzed by nitrogenase from Azotobacter vinelandii.镁腺苷5'-三磷酸在棕色固氮菌固氮酶催化的析氢反应中的作用
Biochemistry. 1980 May 27;19(11):2333-42. doi: 10.1021/bi00552a009.
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Correlation between rate constant for reduction and redox potential as a basis for systematic investigation of reaction mechanisms of electron transfer proteins.还原速率常数与氧化还原电位之间的相关性作为电子传递蛋白反应机制系统研究的基础。
Proc Natl Acad Sci U S A. 1983 Nov;80(22):6740-4. doi: 10.1073/pnas.80.22.6740.
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Redox potentials of algal and cyanobacterial flavodoxins.藻类和蓝细菌黄素氧还蛋白的氧化还原电位。
Biochem J. 1984 Feb 1;217(3):845-50. doi: 10.1042/bj2170845.
7
The mechanism of Klebsiella pneumoniae nitrogenase action. Simulation of the dependences of H2-evolution rate on component-protein concentration and ratio and sodium dithionite concentration.肺炎克雷伯菌固氮酶作用机制。模拟氢气释放速率对组分蛋白浓度及比例和连二亚硫酸钠浓度的依赖性。
Biochem J. 1984 Dec 15;224(3):903-9. doi: 10.1042/bj2240903.
8
The mechanism of Klebsiella pneumoniae nitrogenase action. The determination of rate constants required for the simulation of the kinetics of N2 reduction and H2 evolution.肺炎克雷伯菌固氮酶作用机制。模拟N2还原和H2释放动力学所需速率常数的测定。
Biochem J. 1984 Dec 15;224(3):895-901. doi: 10.1042/bj2240895.
9
The mechanism of Klebsiella pneumoniae nitrogenase action. Pre-steady-state kinetics of an enzyme-bound intermediate in N2 reduction and of NH3 formation.肺炎克雷伯菌固氮酶的作用机制。N2还原过程中酶结合中间体及NH3形成的预稳态动力学。
Biochem J. 1984 Dec 15;224(3):887-94. doi: 10.1042/bj2240887.
10
The mechanism of Klebsiella pneumoniae nitrogenase action. Pre-steady-state kinetics of H2 formation.肺炎克雷伯菌固氮酶作用机制。氢气形成的预稳态动力学。
Biochem J. 1984 Dec 15;224(3):877-86. doi: 10.1042/bj2240877.

涉及黄素氧还蛋白和一种天然氧化还原伴侣——固氮酶铁蛋白的电子转移研究。蛋白质 - 蛋白质相互作用的构象限制以及蛋白质复合物内电子转移的动力学。

Electron-transfer studies involving flavodoxin and a natural redox partner, the iron protein of nitrogenase. Conformational constraints on protein-protein interactions and the kinetics of electron transfer within the protein complex.

作者信息

Thorneley R N, Deistung J

机构信息

A.F.R.C.-I.P.S.R., Nitrogen Fixation Laboratory, University of Sussex, Brighton, U.K.

出版信息

Biochem J. 1988 Jul 15;253(2):587-95. doi: 10.1042/bj2530587.

DOI:10.1042/bj2530587
PMID:3140782
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1149338/
Abstract

The kinetics of electron-transfer reactions involving flavodoxins from Klebsiella pneumoniae (KpFld), Azotobacter chroococcum (AcFld), Anacystis nidulans (AnFld) and Megasphaera elsdenii (MeFld), the free, MgADP-bound and MgATP-bound forms of the Fe protein component of nitrogenase from K. pneumoniae [Kp2, Kp2(MgADP)2 and Kp2(MgATP)2] and Na2S2O4 were studied by stopped-flow spectrophotometry. Kinetic evidence was obtained for the formation of binary protein complexes involving KpFldSQ (semiquinone) with either Kp2(MgADP)2 (KD = 49 microM) or Kp2(MgATP)2 (KD = 13 microM) but not with Kp2 (KD greater than 730 microM). The binding of 2MgATP or 2MgADP to Kp2 therefore not only shifts the midpoint potential (Em) of the [4Fe-4S] centre from -200 mV to -320 mV or -350 mV respectively but also changes the affinity of Kp2 for KpFldSQ. Thermodynamically unfavourable electron from Kp2(MgADP)2 and Kp2(MgATP)2 to KpFldSQ occurs within the protein complexes with k = 1.2 s-1 (delta E = -72 mV) and 0.5 s-1 (delta E = -120 mV) respectively. Although AcFldSQ is reduced by Kp2, Kp2(MgADP)2 and Kp2(MgATP)2 (k = 8 x 10(3), 2.4 x 10(3) and 9 x 10(2) M-1.s-1 respectively), protein-complex formation is weak in each case (KD greater than 700 microM). Electron transfer in the physiologically important and thermodynamically favourable direction from Kp2FldHQ (hydroquinone) and AcFldHQ to Kp2ox.(MgADP)2 (the state of Kp2 that accepts electrons from FldHQ in the catalytic cycle of nitrogenase) is rapid (k greater than 10(6) M-1.s-1). The second-order rate constants for the reduction of KpFldSQ, AcFldSQ, AnFldSQ and MeFldSQ by SO2.- (active reductant formed by the predissociation of S2O4(2-) ion) exhibited the linear free-energy relationship predicted by the Marcus theory of electron transfer.

摘要

利用停流分光光度法研究了涉及肺炎克雷伯菌黄素氧还蛋白(KpFld)、褐球固氮菌黄素氧还蛋白(AcFld)、集胞藻黄素氧还蛋白(AnFld)和埃氏巨球型菌黄素氧还蛋白(MeFld)的电子转移反应动力学,以及肺炎克雷伯菌固氮酶铁蛋白组分的游离形式、MgADP结合形式和MgATP结合形式[Kp2、Kp2(MgADP)2和Kp2(MgATP)2]与连二亚硫酸钠(Na2S2O4)的反应动力学。动力学证据表明,KpFldSQ(半醌)与Kp2(MgADP)2(解离常数KD = 49 μM)或Kp2(MgATP)2(KD = 13 μM)形成二元蛋白质复合物,但不与Kp2形成(KD大于730 μM)。因此,2MgATP或2MgADP与Kp2的结合不仅将[4Fe-4S]中心的中点电位(Em)分别从-200 mV变为-320 mV或-350 mV,还改变了Kp2对KpFldSQ的亲和力。在蛋白质复合物中,从Kp2(MgADP)2和Kp2(MgATP)2到KpFldSQ的热力学不利电子转移分别以k = 1.2 s-1(ΔE = -72 mV)和0.5 s-1(ΔE = -120 mV)的速率发生。尽管AcFldSQ可被Kp2、Kp2(MgADP)2和Kp2(MgATP)2还原(速率常数分别为8×10³、2.4×10³和9×10² M⁻¹·s⁻¹),但每种情况下蛋白质复合物的形成都很弱(KD大于700 μM)。在生理上重要且热力学有利的方向上,从Kp2FldHQ(对苯二酚)和AcFldHQ到Kp2ox.(MgADP)2(在固氮酶催化循环中从FldHQ接受电子的Kp2状态)的电子转移很快(k大于10⁶ M⁻¹·s⁻¹)。SO₂⁻(由S₂O₄²⁻离子预解离形成的活性还原剂)还原KpFldSQ、AcFldSQ、AnFldSQ和MeFldSQ的二级速率常数呈现出马库斯电子转移理论预测的线性自由能关系。