Chemistry Department, Faculty of Science, King Abdulaziz University, P.O Box 42805, Jeddah, 21589, Saudi Arabia.
Department of Chemistry, Faculty of Science, Benha University, P.O. Box 13518, Benha, Egypt.
J Mol Model. 2019 Aug 23;25(9):265. doi: 10.1007/s00894-019-4147-8.
In this paper, the possible interactions between 5-fluorouracil (5FU) as an anticancer drug and gallium nitride (GaN) nanocage (NC) in aqueous solution have been investigated using DFT/CPCM/B3LYP-D/6-31G(d,p) level of theory. Eleven different orientations were used to mimic the 5FU adsorbed on GaN (5FU@GaNNC). To investigate the interaction mechanism between the two components, the adsorption energies and thermodynamic parameters, the electronic properties such as the energies and orbitals distribution of the highest occupied molecular orbital (HOMO), the lowest unoccupied molecular orbital (LUMO), the HOMO-LUMO energy gaps (E), the density of states (DOS), partial DOS (PDOS), and the molecular electrostatic potential (MEP) have been calculated and compared. The natural bond orbitals (NBOs) and the quantum theory of atoms in molecules (QTAIM) calculations have been applied for understanding chemical interactions and chemical bonding. Additionally, some quantum molecular descriptors were calculated for the understanding of molecular reactivity. Main results revealed that (1) the key factor that leads to stabilization of the formed complex/s is the relocation of one of the H atoms that originally belonging to one of the N atoms in 5FU to one of the nearest Ga atoms in GaNNC and (2) the adsorption energies for the eleven adsorbed systems are relatively larger compared with reported similar systems indicating from a theoretical point of view, a probable chemisorption type of adsorption and the privilege of GaNNC as a carrier for 5FU drug. Graphical abstract Simulation of the most stable adsorbed system of 5-fluorouracil anticancer drug on Gallium nitride nanocage.
本文采用 DFT/CPCM/B3LYP-D/6-31G(d,p) 理论水平,研究了在水溶液中抗癌药物 5-氟尿嘧啶(5FU)与氮化镓(GaN)纳米笼(NC)之间可能的相互作用。采用 11 种不同的取向模拟 5FU 吸附在 GaN(5FU@GaNNC)上。为了研究两种成分之间的相互作用机制,计算并比较了吸附能和热力学参数、电子性质(如最高占据分子轨道(HOMO)、最低未占据分子轨道(LUMO)的能量和轨道分布、HOMO-LUMO 能隙(E)、态密度(DOS)、部分态密度(PDOS)和分子静电势(MEP)。自然键轨道(NBOs)和原子在分子中的量子理论(QTAIM)计算用于理解化学相互作用和化学键。此外,还计算了一些量子分子描述符,以理解分子反应性。主要结果表明:(1)导致形成的配合物/复合物稳定的关键因素是将原来属于 5FU 中一个 N 原子的一个 H 原子迁移到 GaNNC 中最近的一个 Ga 原子上;(2)与报道的类似体系相比,十一吸附体系的吸附能相对较大,从理论角度表明,可能是化学吸附类型的吸附,GaNNC 作为 5FU 药物载体的优势。