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中华鳖热休克蛋白70/110的全基因组鉴定与分析以揭示其潜在功能

Genomewide identification and analysis of heat-shock proteins 70/110 to reveal their potential functions in Chinese soft-shelled turtle .

作者信息

Liu Tengfei, Han Yawen, Liu Ye, Zhao Huiying

机构信息

College of Veterinary Medicine Northwest A&F University Yangling China.

出版信息

Ecol Evol. 2019 May 20;9(12):6968-6985. doi: 10.1002/ece3.5264. eCollection 2019 Jun.

Abstract

Heat-shock proteins 70/110 (Hsp70/110) are vital molecular chaperones and stress proteins whose expression and production are generally induced by extreme temperatures or external stresses. The Hsp70/110 family is largely conserved in diverse animals. Although many reports have studied and elaborated on the characteristics of Hsp70/110 in various species, the systematic identification and analysis of Hsp70/110 are still poor in turtles. In this study, a genomewide search was performed, and 18 candidate family genes were identified in Chinese soft-shelled turtle, . These PsHSP70/110 proteins contained the conserved "heat shock protein 70" domain. Phylogenetic analysis of PsHSP70/110 and their homologs revealed evolutionary conservation of Hsp70/110 across different species. Tissue-specific expression analysis showed that these genes were differentially expressed in different tissues of . Furthermore, to examine the putative biological functions of , the dynamic expression of genes was analyzed in the testis of during seasonal spermatogenesis following germ cell apoptosis. Notably, genes such as , , and were significantly upregulated in testes along with a seasonal decrease in apoptosis. Protein interaction prediction revealed that PsHSPA1B-L, PsHSPA2, and PsHSPA8 may interact with each other and participate in the MAPK signaling pathway. Moreover, immunohistochemical analysis showed that PsHSPA1B-L, PsHSPA2, and PsHSPA8 protein expression was associated with seasonal temperature variation. The expression profiling and interaction relationships of the PsHSPA1B-L, PsHSPA2, and PsHSPA8 proteins implied their potential roles in inhibiting the apoptosis of germ cells in . These results provide insights into PsHSP70/110 functions and will serve as a rich resource for further investigation of HSP70/110 family genes in and other turtles.

摘要

热休克蛋白70/110(Hsp70/110)是至关重要的分子伴侣和应激蛋白,其表达和产生通常由极端温度或外部应激诱导。Hsp70/110家族在多种动物中高度保守。尽管许多报告研究并阐述了不同物种中Hsp70/110的特征,但龟类中Hsp70/110的系统鉴定和分析仍然不足。在本研究中,进行了全基因组搜索,在中国软壳龟中鉴定出18个候选家族基因。这些中华鳖HSP70/110蛋白含有保守的“热休克蛋白70”结构域。对中华鳖HSP70/110及其同源物的系统发育分析揭示了Hsp70/110在不同物种间的进化保守性。组织特异性表达分析表明,这些基因在中华鳖的不同组织中差异表达。此外,为了研究中华鳖HSP70/110的假定生物学功能,分析了生殖细胞凋亡后季节性精子发生过程中中华鳖睾丸中这些基因的动态表达。值得注意的是,随着凋亡的季节性减少,中华鳖睾丸中的某些基因,如[具体基因名称未给出]、[具体基因名称未给出]和[具体基因名称未给出]显著上调。蛋白质相互作用预测表明,中华鳖HSPA1B-L、HSPA2和HSPA8可能相互作用并参与丝裂原活化蛋白激酶(MAPK)信号通路。此外,免疫组织化学分析表明,中华鳖HSPA1B-L、HSPA2和HSPA8蛋白表达与季节性温度变化相关。中华鳖HSPA1B-L、HSPA2和HSPA8蛋白的表达谱和相互作用关系暗示了它们在抑制中华鳖生殖细胞凋亡中的潜在作用。这些结果为中华鳖HSP70/110的功能提供了见解,并将为进一步研究中华鳖和其他龟类中的HSP70/110家族基因提供丰富资源。

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