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城市绿地中的抗生素抗性反映了工业分布模式。

Antibiotic resistance in urban green spaces mirrors the pattern of industrial distribution.

机构信息

Faculty of Veterinary and Agricultural Sciences, The University of Melbourne, VIC 3010, Australia.

Faculty of Veterinary and Agricultural Sciences, The University of Melbourne, VIC 3010, Australia.

出版信息

Environ Int. 2019 Nov;132:105106. doi: 10.1016/j.envint.2019.105106. Epub 2019 Aug 29.

Abstract

Urban green spaces are closely related to the activities and health of urban residents. Turf grass and soil are two major interfaces between the environmental and human microbiome, which represent potential pathways for the spread of antibiotic resistance genes (ARGs) from environmental to human microbiome through skin-surface contact. However, the information regarding the prevalence of ARGs in urban green spaces and drivers in shaping their distribution patterns remain unclear. Here, we profiled a wide spectrum of ARGs in grass phyllosphere and soils from 40 urban parks across Greater Melbourne, Australia, using high throughput quantitative PCR. A total of 217 and 218 unique ARGs and MGEs were detected in grass phyllosphere and soils, respectively, conferring resistance to almost all major classes of antibiotics commonly used in human and animals. The plant microbiome contained a core resistome, which occupied >84% of the total abundance of ARGs. In contrast, no core resistome was identified in the soil microbiome. The difference between plant and soil resistome composition was attributed to the difference in bacterial community structure and intensity of environmental and anthropogenic influence. Most importantly, the abundance of ARGs in urban green spaces was significantly positively related to industrial factors including total number of business, number of manufacturing, and number of electricity, gas, water and waste services in the region. Structural equation models further revealed that industrial distribution was a major factor shaping the ARG profiles in urban green spaces after accounting for multiple drivers. These findings have important implications for mitigation of the potential risks posed by ARGs to urban residents.

摘要

城市绿地与城市居民的活动和健康密切相关。草坪草和土壤是环境和人类微生物组之间的两个主要界面,它们代表了抗生素耐药基因(ARGs)通过皮肤接触从环境向人类微生物组传播的潜在途径。然而,有关城市绿地中 ARG 的流行情况及其分布模式的驱动因素的信息尚不清楚。在这里,我们使用高通量定量 PCR 对来自澳大利亚大墨尔本地区 40 个城市公园的草叶际和土壤中的广谱 ARGs 进行了分析。在草叶际和土壤中分别检测到 217 个和 218 个独特的 ARGs 和 MGEs,它们赋予了对几乎所有人类和动物常用抗生素的抗性。植物微生物组包含一个核心抗药性组,占 ARGs 总丰度的>84%。相比之下,土壤微生物组中没有鉴定出核心抗药性组。植物和土壤抗药性组组成的差异归因于细菌群落结构的差异和环境与人为影响的强度。最重要的是,城市绿地中 ARG 的丰度与工业因素呈显著正相关,这些因素包括该地区的企业总数、制造业数量和电力、燃气、水和废物服务数量。结构方程模型进一步表明,在考虑了多个驱动因素后,工业分布是塑造城市绿地中 ARG 分布模式的主要因素。这些发现对减轻 ARGs 对城市居民构成的潜在风险具有重要意义。

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