Torres-Cerna Carlos E, Morales J Alejandro, Hernandez-Vargas Esteban A
Computer Science Department, Universidad de Guadalajara, Guadalajara, Mexico.
Frankfurt Institute for Advanced Studies, Frankfurt, Germany.
Front Microbiol. 2019 Aug 20;10:1835. doi: 10.3389/fmicb.2019.01835. eCollection 2019.
Bacteria control the expression of specific genes by Quorum Sensing (QS). This works using small signaling molecules called Autoinducers (AIs), for example, the Autoinducer-2 (AI-2). In this work, we present a mathematical model that represents the AI-2 dynamics on , which is linked to the cell growth and the operon expression. The model is adjusted using experimental data. Our results suggest that the extracellular AI-2 activity level depends on the cell growth rate, and this activity depends on the cell exponential growth phase. The model was adapted to simulate the interference of QS mechanisms in a co-culture of two strains: a wild type strain and a knock out strain that detects AI-2 but does not produce it. Co-culture simulations unveiled two conditions to avoid the QS on the wild strain: when the knock out takes control of the growth medium and overcomes the wild strain, or when is pre-cultured to its mid-exponential phase and then added to the wild strain culture. Model simulations unveiled new insights about the interference of bacterial communication and offer new tools for QS control.
细菌通过群体感应(QS)来控制特定基因的表达。这一过程利用称为自诱导物(AIs)的小信号分子来实现,例如自诱导物-2(AI-2)。在这项工作中,我们提出了一个数学模型,该模型描述了AI-2在 上的动态变化,它与细胞生长和 操纵子表达相关联。该模型通过实验数据进行了调整。我们的结果表明,细胞外AI-2活性水平取决于细胞生长速率,并且这种活性取决于细胞指数生长期。该模型经过调整,用于模拟群体感应机制在两种 菌株共培养中的干扰情况:一种是野生型菌株,另一种是敲除菌株,该敲除菌株能检测AI-2但不产生它。共培养模拟揭示了两种避免野生菌株群体感应的条件:当敲除菌株控制生长培养基并战胜野生菌株时,或者当 将其预培养至指数中期阶段然后添加到野生菌株培养物中时。模型模拟揭示了关于细菌通讯干扰的新见解,并为群体感应控制提供了新工具。