Panda Debabrata, Mishra Swati S, Mohanty Sangram K, Behera Prafulla K, Lenka Sangram K
Department of Biodiversity and Conservation of Natural Resources, Central University of Orissa, Koraput, 764 021, Odisha, India.
National Rice Research Institute (ICAR), Cuttack, 753 006, Odisha, India.
Data Brief. 2019 Aug 12;25:104363. doi: 10.1016/j.dib.2019.104363. eCollection 2019 Aug.
Precise physiological and molecular marker-based assessment provides information about the extent of genetic diversity, which helps for effective breeding programmes. We have conducted detailed physiological and molecular marker-based assessment of selected eight indigenous rice landraces from Koraput, India along with tolerant (N22) and susceptible (IR64) check varieties under control and simulated drought stress using polyethylene glycol (PEG) 6000. After exposure to different levels of drought stress, relative germination performance (RGP), seedling vigour index (SVI) and relative growth index (RGI) were significantly declined in all the rice landraces compared to the control plants and significant varietal differences were observed. Genetic relationship among the studied rice landraces was assessed with 24 previously reported drought tolerance linked Simple Sequence Repeat (SSR) markers. A total of 53 alleles were detected at the loci of the 24 markers across the 10 rice accessions The Nei's gene diversity () and the polymorphism information content () ranged from 0 to 0.665 and 0 to 0.687, respectively. Six SSR loci, RM276, RM411, RM3, RM263, RM216 and RM28199, provided the highest values and are potential for exploring the genetic diversity of studied rice lines for drought tolerance. Four rice genotypes (Butkichudi, Haldichudi, Machakanta and Kalajeera) showed the highest genetic distance with tolerant check variety (N22) and can be considered as valuable genetic resources for drought breeding program.
基于精确生理和分子标记的评估可提供有关遗传多样性程度的信息,这有助于开展有效的育种计划。我们利用聚乙二醇(PEG)6000,在对照和模拟干旱胁迫条件下,对来自印度科拉普特的8个选定本土水稻地方品种以及耐性品种(N22)和感病品种(IR64)进行了基于详细生理和分子标记的评估。在遭受不同程度的干旱胁迫后,与对照植株相比,所有水稻地方品种的相对发芽性能(RGP)、幼苗活力指数(SVI)和相对生长指数(RGI)均显著下降,且观察到显著的品种差异。利用24个先前报道的与耐旱性相关的简单序列重复(SSR)标记,评估了所研究水稻地方品种之间的遗传关系。在10个水稻种质的24个标记位点上共检测到53个等位基因。Nei氏基因多样性()和多态性信息含量()分别在0至0.665和0至0.687之间。6个SSR位点RM276、RM411、RM3、RM263、RM216和RM28199具有最高的值,在探索所研究水稻品系的耐旱遗传多样性方面具有潜力。四个水稻基因型(Butkichudi、Haldichudi、Machakanta和Kalajeera)与耐性对照品种(N22)的遗传距离最远,可被视为耐旱育种计划的宝贵遗传资源。