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玉米叶绿体rpS11的核苷酸序列,其在真核生物、细菌和质体之间具有保守氨基酸序列。

Nucleotide sequence of maize chloroplast rpS11 with conserved amino acid sequence between eukaryotes, bacteria and plastids.

作者信息

Markmann-Mulisch U, Subramanian A R

机构信息

Max-Planck-Institut für Molekulare Genetik, Abteilung Wittmann, Berlin, (Dahlem), West Germany.

出版信息

Biochem Int. 1988 Oct;17(4):655-64.

PMID:3149198
Abstract

Nucleotide sequence of a 721 base pair segment of maize chloroplast DNA, encoding the putative chloroplast ribosomal protein S11 at physical map position 33.1-33.5 Kbp, is described. A Shine-Dalgarno sequence and computer-derived stem-loop structures of dyad symmetry are present in the spacer region between rpS11 and its 5' upstream gene rpL36. The deduced amino acid sequence of maize chloroplast S11 shows 69%, 66%, 62%, 57%, 48% and 45% sequence identity to the corresponding sequences of tobacco, spinach, pea, liverwort, Escherichia coli and Bacillus subtilis, respectively, and 41% sequence identity to three eukaryotic cytoplasmic ribosomal proteins, S14 of Chinese hamster and of human and rp59 of yeast. Maize chloroplast r-protein S11 is larger than the other published S11s of plants and bacteria, due to the apparent tandem introduction of a short sequence stretch of internal homology.

摘要

本文描述了玉米叶绿体DNA中一段721个碱基对片段的核苷酸序列,该片段在物理图谱位置33.1 - 33.5千碱基对处编码假定的叶绿体核糖体蛋白S11。在rpS11及其5'上游基因rpL36之间的间隔区存在一个Shine - Dalgarno序列和计算机推导的二元对称茎环结构。玉米叶绿体S11的推导氨基酸序列与烟草、菠菜、豌豆、地钱、大肠杆菌和枯草芽孢杆菌的相应序列的序列同一性分别为69%、66%、62%、57%、48%和45%,与三种真核细胞质核糖体蛋白,即中国仓鼠和人类的S14以及酵母的rp59的序列同一性为41%。由于内部同源性短序列片段的明显串联引入,玉米叶绿体核糖体蛋白S11比其他已发表的植物和细菌的S11更大。

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Plant Mol Biol. 1993 Feb;21(3):543-8. doi: 10.1007/BF00028811.
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J Bacteriol. 1993 Nov;175(22):7150-9. doi: 10.1128/jb.175.22.7150-7159.1993.
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Microbiol Rev. 1994 Dec;58(4):700-54. doi: 10.1128/mr.58.4.700-754.1994.
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Mol Gen Genet. 1989 May;217(1):97-104. doi: 10.1007/BF00330947.