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玉米叶绿体DNA编码一种与细菌核糖体组装蛋白S4同源的蛋白质序列。

Maize chloroplast DNA encodes a protein sequence homologous to the bacterial ribosome assembly protein S4.

作者信息

Subramanian A R, Steinmetz A, Bogorad L

出版信息

Nucleic Acids Res. 1983 Aug 11;11(15):5277-86. doi: 10.1093/nar/11.15.5277.

DOI:10.1093/nar/11.15.5277
PMID:6308577
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC326263/
Abstract

A cloned restriction fragment of maize chloroplast DNA (Bam H1 fragment 5) is shown to contain an open reading frame which encodes a basic protein of 201 amino acid residues with 40-50% sequence homology to E. coli ribosomal protein S4. Based on the experimentally determined sequence homology between the highly conserved bacterial ribosomal protein L12 and its chloroplast homologue (Bartsch M., Kimura, M. and Subramanian, A.R. (1982) Proc. Natl. Acad. Sci. USA 79, 6871), we conclude that this reading frame represents the maize chloroplast S4 gene. The nucleotide sequence of a 1100 base pair DNA segment containing the putative gene is presented.

摘要

已表明玉米叶绿体DNA的一个克隆限制片段（Bam H1片段5）含有一个开放阅读框，该开放阅读框编码一种由201个氨基酸残基组成的碱性蛋白，与大肠杆菌核糖体蛋白S4具有40 - 50%的序列同源性。基于实验确定的高度保守的细菌核糖体蛋白L12与其叶绿体同源物之间的序列同源性（Bartsch M.、Kimura M.和Subramanian A.R.（1982年）《美国国家科学院院刊》79，6871），我们得出结论，这个阅读框代表玉米叶绿体S4基因。本文给出了包含该推定基因的一个1100碱基对DNA片段的核苷酸序列。

相似文献

1
Maize chloroplast DNA encodes a protein sequence homologous to the bacterial ribosome assembly protein S4.玉米叶绿体DNA编码一种与细菌核糖体组装蛋白S4同源的蛋白质序列。
Nucleic Acids Res. 1983 Aug 11;11(15):5277-86. doi: 10.1093/nar/11.15.5277.
2
A putative gene of tobacco chloroplast coding for ribosomal protein similar to E. coli ribosomal protein S19.一个烟草叶绿体的假定基因，其编码的核糖体蛋白与大肠杆菌核糖体蛋白S19相似。
Nucleic Acids Res. 1983 Mar 25;11(6):1913-8. doi: 10.1093/nar/11.6.1913.
3
The gene for Spirodela oligorhiza chloroplast ribosomal protein homologous to E. coli ribosomal protein L16 is split by a large intron near its 5' end: structure and expression.与大肠杆菌核糖体蛋白L16同源的少根紫萍叶绿体核糖体蛋白基因在其5'端附近被一个大内含子分割：结构与表达
Nucleic Acids Res. 1986 Apr 25;14(8):3181-95. doi: 10.1093/nar/14.8.3181.
4
Nucleotide sequence and linkage map position of the genes for ribosomal proteins L14 and S8 in the maize chloroplast genome.玉米叶绿体基因组中核糖体蛋白L14和S8基因的核苷酸序列及连锁图谱位置。
Eur J Biochem. 1988 Jan 4;170(3):507-14. doi: 10.1111/j.1432-1033.1988.tb13728.x.
5
Computed spatial homology between the L12 protein of chloroplast ribosome and 1.7 A structure of Escherichia coli L12 domain.叶绿体核糖体L12蛋白与大肠杆菌L12结构域1.7埃结构之间的计算空间同源性。
Biochem Int. 1984 Jan;8(1):69-76.
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Nucleotide sequence of maize chloroplast rpS11 with conserved amino acid sequence between eukaryotes, bacteria and plastids.玉米叶绿体rpS11的核苷酸序列，其在真核生物、细菌和质体之间具有保守氨基酸序列。
Biochem Int. 1988 Oct;17(4):655-64.
7
The chloroplast gene encoding ribosomal protein S4 in Chlamydomonas reinhardtii spans an inverted repeat--unique sequence junction and can be mutated to suppress a streptomycin dependence mutation in ribosomal protein S12.莱茵衣藻中编码核糖体蛋白S4的叶绿体基因跨越一个反向重复序列——独特序列连接区，并且可以发生突变以抑制核糖体蛋白S12中的链霉素依赖突变。
Mol Gen Genet. 1995 May 10;247(3):295-305. doi: 10.1007/BF00293197.
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Chloroplast DNA replication in vitro: site-specific initiation from preferred templates.叶绿体DNA的体外复制：从首选模板进行位点特异性起始。
Nucleic Acids Res. 1988 Jun 24;16(12):5603-20. doi: 10.1093/nar/16.12.5603.
9
Genes for the eight ribosomal proteins are clustered on the chloroplast genome of tobacco (Nicotiana tabacum): similarity to the S10 and spc operons of Escherichia coli.烟草（Nicotiana tabacum）叶绿体基因组上八个核糖体蛋白的基因成簇排列：与大肠杆菌的S10和spc操纵子相似。
Proc Natl Acad Sci U S A. 1986 Aug;83(16):6030-4. doi: 10.1073/pnas.83.16.6030.
10
Chloroplast ribosomal protein L12 is encoded in the nucleus: construction and identification of its cDNA clones and nucleotide sequence including the transit peptide.叶绿体核糖体蛋白L12由细胞核编码：其cDNA克隆的构建与鉴定以及包括转运肽在内的核苷酸序列
Biochemistry. 1989 Apr 18;28(8):3525-9. doi: 10.1021/bi00434a056.

引用本文的文献

1
Characterization of the spinach chloroplast genes for the S4 ribosomal protein, tRNA(Thr) (UGU) and tRNA (Ser) (GGA).菠菜叶绿体 S4 核糖体蛋白、tRNA（苏氨酸）（UGU）和 tRNA（丝氨酸）（GGA）基因的特性。
Plant Mol Biol. 1986 Jan;7(1):63-70. doi: 10.1007/BF00020132.
2
Transcription of ten ribosomal protein genes from tobacco chloroplasts: a compilation of ribosomal protein genes found in the tobacco chloroplast genome.从烟草叶绿体中转录的十个核糖体蛋白基因：烟草叶绿体基因组中发现的核糖体蛋白基因汇编。
Plant Mol Biol. 1988 Sep;11(5):589-600. doi: 10.1007/BF00017459.
3
Isolation, characterization, phosphorylation and site of synthesis of Spinacia chloroplast ribosomal proteins.菠菜叶绿体核糖体蛋白的分离、鉴定、磷酸化及合成部位。
Curr Genet. 1984 Feb;8(2):147-54. doi: 10.1007/BF00420227.
4
Localization of three chloroplast ribosomal protein genes at the left junction of the large single copy region and the inverted repeat of Spirodela oligorhiza chloroplast DNA.三个叶绿体核糖体蛋白基因在大单拷贝区和少根泽兰叶绿体 DNA 反向重复的左侧连接处的定位。
Curr Genet. 1985 Mar;9(3):211-9. doi: 10.1007/BF00420314.
5
Lawrence Bogorad (1921-2003), a pioneer in photosynthesis research: a tribute.劳伦斯·博戈拉德（1921 - 2003），光合作用研究的先驱：一篇颂词。
Photosynth Res. 2005;83(1):17-24. doi: 10.1007/s11120-004-6316-5.
6
Plastid, nuclear and reverse transcriptase sequences in the mitochondrial genome of Oenothera: is genetic information transferred between organelles via RNA?月见草线粒体基因组中的质体、核和逆转录酶序列：遗传信息是否通过RNA在细胞器之间传递？
EMBO J. 1987 Oct;6(10):2857-63. doi: 10.1002/j.1460-2075.1987.tb02587.x.
7
Nucleotide sequence of maize chloroplast rpl32: completing the apparent set of plastid ribosomal protein genes and their tentative operon organization.玉米叶绿体rpl32的核苷酸序列：完成质体核糖体蛋白基因的明显集合及其初步操纵子组织
Plant Mol Biol. 1993 Feb;21(3):543-8. doi: 10.1007/BF00028811.
8
Genes for components of the chloroplast translational apparatus are conserved in the reduced 73-kb plastid DNA of the nonphotosynthetic euglenoid flagellate Astasia longa.叶绿体翻译装置组成部分的基因，在非光合性裸藻鞭毛虫长形无隔藻（Astasia longa）缩减的73千碱基质体DNA中是保守的。
Curr Genet. 1994 Sep;26(3):256-62. doi: 10.1007/BF00309557.
9
Chloroplast ribosomes and protein synthesis.叶绿体核糖体与蛋白质合成
Microbiol Rev. 1994 Dec;58(4):700-54. doi: 10.1128/mr.58.4.700-754.1994.
10
The chloroplast gene encoding ribosomal protein S4 in Chlamydomonas reinhardtii spans an inverted repeat--unique sequence junction and can be mutated to suppress a streptomycin dependence mutation in ribosomal protein S12.莱茵衣藻中编码核糖体蛋白S4的叶绿体基因跨越一个反向重复序列——独特序列连接区，并且可以发生突变以抑制核糖体蛋白S12中的链霉素依赖突变。
Mol Gen Genet. 1995 May 10;247(3):295-305. doi: 10.1007/BF00293197.

本文引用的文献

1
Purification, primary structure, and homology relationships of a chloroplast ribosomal protein.叶绿体核糖体蛋白的纯化、一级结构和同源关系。
Proc Natl Acad Sci U S A. 1982 Nov;79(22):6871-5. doi: 10.1073/pnas.79.22.6871.
2
Overlapping divergent genes in the maize chloroplast chromosome and in vitro transcription of the gene for tRNA.玉米叶绿体染色体中重叠的分歧基因和 tRNA 基因的体外转录。
Proc Natl Acad Sci U S A. 1981 Jun;78(6):3423-7. doi: 10.1073/pnas.78.6.3423.
3
Maize chloroplast DNA fragment encoding the large subunit of ribulosebisphosphate carboxylase.编码核酮糖二磷酸羧化酶大亚基的玉米叶绿体DNA片段。
Proc Natl Acad Sci U S A. 1977 Dec;74(12):5487-91. doi: 10.1073/pnas.74.12.5487.
4
Codon catalog usage is a genome strategy modulated for gene expressivity.密码子编目使用是一种为基因表达性而调节的基因组策略。
Nucleic Acids Res. 1981 Jan 10;9(1):r43-74. doi: 10.1093/nar/9.1.213-b.
5
Primary structure of Escherichia coli ribosomal protein S1 and of its gene rpsA.大肠杆菌核糖体蛋白S1及其基因rpsA的一级结构。
Proc Natl Acad Sci U S A. 1982 Feb;79(4):1008-11. doi: 10.1073/pnas.79.4.1008.
6
Nucleotide sequences of five maize chloroplast transfer RNA genes and their flanking regions.五个玉米叶绿体转运RNA基因及其侧翼区域的核苷酸序列。
J Biol Chem. 1983 May 10;258(9):5503-11.
7
A putative gene of tobacco chloroplast coding for ribosomal protein similar to E. coli ribosomal protein S19.一个烟草叶绿体的假定基因，其编码的核糖体蛋白与大肠杆菌核糖体蛋白S19相似。
Nucleic Acids Res. 1983 Mar 25;11(6):1913-8. doi: 10.1093/nar/11.6.1913.
8
The maize chloroplast genes for the beta and epsilon subunits of the photosynthetic coupling factor CF1 are fused.光合作用偶联因子CF1的β和ε亚基的玉米叶绿体基因是融合的。
Nucleic Acids Res. 1982 Aug 25;10(16):4985-5002. doi: 10.1093/nar/10.16.4985.
9
Sequencing end-labeled DNA with base-specific chemical cleavages.通过碱基特异性化学切割对末端标记的DNA进行测序。
Methods Enzymol. 1980;65(1):499-560. doi: 10.1016/s0076-6879(80)65059-9.
10
Components of bacterial ribosomes.细菌核糖体的组成部分。
Annu Rev Biochem. 1982;51:155-83. doi: 10.1146/annurev.bi.51.070182.001103.