Institute of Biomedical Engineering, Department of Engineering Science, University of Oxford, Oxford, UK.
Department of Computing, Imperial College London, London, UK.
Sci Rep. 2019 Sep 10;9(1):12938. doi: 10.1038/s41598-019-49350-3.
Myelination is considered to be an important developmental process during human brain maturation and closely correlated with gestational age. Quantitative assessment of the myelination status requires dedicated imaging, but the conventional T-weighted scans routinely acquired during clinical imaging of neonates carry signatures that are thought to be associated with myelination. In this work, we develop a quatitative marker of progressing myelination for assessment preterm neonatal brain maturation based on novel automatic segmentation method for myelin-like signals on T-weighted magnetic resonance images. Firstly we define a segmentation protocol for myelin-like signals. We then develop an expectation-maximization framework to obtain the automatic segmentations of myelin-like signals with explicit class for partial volume voxels whose locations are configured in relation to the composing pure tissues via second-order Markov random fields. The proposed segmentation achieves high Dice overlaps of 0.83 with manual annotations. The automatic segmentations are then used to track volumes of myelinated tissues in the regions of the central brain structures and brainstem. Finally, we construct a spatio-temporal growth models for myelin-like signals, which allows us to predict gestational age at scan in preterm infants with root mean squared error 1.41 weeks.
髓鞘形成被认为是人类大脑成熟过程中的一个重要发育过程,与胎龄密切相关。髓鞘形成状态的定量评估需要专门的成像,但在新生儿临床成像中常规获取的常规 T 加权扫描被认为与髓鞘形成有关。在这项工作中,我们开发了一种基于 T 加权磁共振图像上髓鞘样信号的新型自动分割方法,用于评估早产儿脑成熟度的进展性髓鞘形成的定量标志物。首先,我们定义了髓鞘样信号的分割方案。然后,我们开发了一种期望最大化框架,以获得髓鞘样信号的自动分割,具有明确的部分体积体素类别,其位置通过二阶马尔可夫随机场与组成纯组织相关联。所提出的分割方法与手动注释的 Dice 重叠率达到 0.83。然后,自动分割用于跟踪中央脑结构和脑干区域中髓鞘组织的体积。最后,我们构建了髓鞘样信号的时空生长模型,这使我们能够以 1.41 周的均方根误差预测早产儿扫描时的胎龄。