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一种新型裂解性噬菌体感染耐多药 菌属和 梭菌的基因组和蛋白质组特征分析

Genomic and Proteomic Characterizations of , a Novel Lytic Phage Infecting Multidrug-Resistant spp. and C.

作者信息

Ahamed Sk Tousif, Roy Banibrata, Basu Utpal, Dutta Shanta, Ghosh A N, Bandyopadhyay Boudhayan, Giri Nabanita

机构信息

Department of Microbiology, Acharya Prafulla Chandra College, Kolkata, India.

Department of Molecular Biology and Biotechnology, University of Kalyani, Kalyani, India.

出版信息

Front Microbiol. 2019 Aug 22;10:1876. doi: 10.3389/fmicb.2019.01876. eCollection 2019.

Abstract

Shigellosis is a public health threat in developed as well as developing countries like "India." While antibiotic therapy is the mainstay of treatment for shigellosis, current emergence of multidrug-resistant strains of spp. has posed the problem more challenging. Lytic bacteriophages which destroy antibiotic resistant spp. have great potential in this context and hence their identification and detailed characterization is necessary. In this study we presented the isolation and a detailed characterization of a novel bacteriophage , which shows potent lytic activity against multidrug-resistant isolates of , , obtained from clinical specimens from shigellosis patients. It is also active against C. The purified phage is lytic in nature, exhibited absorption within 5-10 min, a latent period of 5-20 min and burst size of ∼28 to ∼146 PFU/cell. The isolated phage shows stability in a broad pH range and survives an hour at 50°C. Genome sequencing and phylogenetic analyses showed that is a novel bacteriophage, which is very closely related to T1-like phages (89.59% identity with Escherichia virus T1). analysis indicates that genome consists of double stranded linear DNA of 50,403 bp (GC content of 45.2%) encoding 82 potential coding sequences, several potential promoters and transcriptional terminators. Under electron microscopy, shows morphology characteristics of the family with an isometric head (61 nm) and a non-contractile tail (155 nm). This is most likely the first report of a lytic bacteriophage that is active against three of the most virulent multidrug-resistant species and therefore might have a potential role in phage therapy of patients infected with these organisms.

摘要

志贺氏菌病在发达国家以及像“印度”这样的发展中国家都是一种公共卫生威胁。虽然抗生素疗法是志贺氏菌病治疗的主要手段,但目前志贺氏菌属多药耐药菌株的出现使这一问题更具挑战性。能破坏抗生素耐药志贺氏菌属的裂解性噬菌体在这种情况下具有很大潜力,因此对它们的鉴定和详细表征是必要的。在本研究中,我们展示了一种新型噬菌体的分离和详细表征,该噬菌体对从志贺氏菌病患者临床标本中获得的多重耐药的宋内志贺氏菌、福氏志贺氏菌和痢疾志贺氏菌菌株表现出强大的裂解活性。它对大肠杆菌也有活性。纯化后的噬菌体本质上具有裂解性,在5 - 10分钟内表现出吸附,潜伏期为5 - 20分钟,裂解量约为28至146个噬菌斑形成单位/细胞。分离出的噬菌体在较宽的pH范围内表现出稳定性,在50°C下能存活一小时。基因组测序和系统发育分析表明,该噬菌体是一种新型噬菌体,与T1样噬菌体密切相关(与大肠杆菌病毒T1的同一性为89.59%)。分析表明,该噬菌体基因组由50,403 bp的双链线性DNA组成(GC含量为45.2%),编码82个潜在的编码序列、几个潜在的启动子和转录终止子。在电子显微镜下,该噬菌体显示出肌尾噬菌体科的形态特征,具有等轴状头部(61纳米)和非收缩性尾部(155纳米)。这很可能是关于一种对三种最具毒性的多药耐药志贺氏菌属物种有活性的裂解性噬菌体的首次报道,因此可能在感染这些病原体的患者的噬菌体治疗中发挥潜在作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/efe2/6714547/94887361a569/fmicb-10-01876-g001.jpg

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