Arya Rakesh, Dabral Deepti, Faruquee Hossain Md, Mazumdar Himangshu, Patgiri Saurav Jyoti, Deka Trinayan, Basumatary Rumi, Kupa Rukuwe-U, Semy Chayale, Kapfo Wetetsho, Liegise Kevideme, Kaur Inderjeet, Choedon Tenzin, Kumar Purnima, Behera Rajendra Kumar, Deori Pranjal, Nath Reema, Khalo Kerekha, Saikia Lahari, Khamo Vinotsole, Nanda Ranjan Kumar
Translational Health Group, International Centre for Genetic Engineering and Biotechnology, New Delhi, 110067, India.
School of Life Sciences, Sambalpur University, Sambalpur, Odisha, 768019, India.
Proteomics Clin Appl. 2020 Jan;14(1):e1900062. doi: 10.1002/prca.201900062. Epub 2019 Oct 9.
Detailed understanding of host pathogen interaction in tuberculosis is an important avenue for identifying novel therapeutic targets. Small extracellular vesicles (EVs) like exosomes that are rich in proteins, nucleic acids and lipids, act as messengers and may show altered composition in disease conditions.
In this case control study, small EVs are isolated from serum of 58 subjects (all male, 33 (15-70) in years) including drug naïve active tuberculosis (ATB: n = 22), non-tuberculosis (NTB: n = 18), and healthy subjects (n = 18). Serum small EVs proteome analysis is carried out using isobaric tag for relative and absolute quantification (iTRAQ) experiments and an independent sample (n = 36) is used for validation.
A set of 132 and 68 proteins are identified in iTRAQ-I (ATB/Healthy) and iTRAQ-II (ATB/NTB) experiments, respectively. Four proteins (KYAT3, SERPINA1, HP, and APOC3) show deregulation (log -fold change > ±0.48, p < 0.05) in ATB with respect to healthy controls and Western blot data corroborated mass spectrometry findings.
These important proteins, involved in neutrophil degranulation, plasma heme scavenging, kynurenine, and lipid metabolism, show deregulation in ATB patients. Identification of such a protein panel in circulating small EVs besides providing novel insights into their role in tuberculosis may prove to be useful targets to develop host-directed therapeutic intervention.
深入了解结核病中宿主与病原体的相互作用是确定新型治疗靶点的重要途径。小细胞外囊泡(EVs),如富含蛋白质、核酸和脂质的外泌体,充当信使,并且在疾病状态下其组成可能会发生改变。
在这项病例对照研究中,从小细胞外囊泡中分离出58名受试者(均为男性,年龄33岁(15 - 70岁))的血清,其中包括初治活动性结核病患者(ATB:n = 22)、非结核病患者(NTB:n = 18)和健康受试者(n = 18)。使用等压标签相对和绝对定量(iTRAQ)实验进行血清小细胞外囊泡蛋白质组分析,并使用独立样本(n = 36)进行验证。
在iTRAQ - I(ATB/健康)和iTRAQ - II(ATB/NTB)实验中分别鉴定出132种和68种蛋白质。四种蛋白质(KYAT3、SERPINA1、HP和APOC3)在ATB患者中相对于健康对照显示出失调(对数变化倍数> ±0.48,p < 0.05),蛋白质印迹数据证实了质谱分析结果。
这些参与中性粒细胞脱颗粒、血浆血红素清除、犬尿氨酸和脂质代谢的重要蛋白质在ATB患者中表现出失调。除了为循环小细胞外囊泡在结核病中的作用提供新见解外,鉴定这样一组蛋白质可能被证明是开发宿主导向性治疗干预的有用靶点。