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采用 RNA-Seq 技术对未成熟和成年大鼠舌上皮组织中的基因进行转录组分析。

Transcriptional profiling of genes in tongue epithelial tissue from immature and adult rats by the RNA-Seq technique.

机构信息

State Key Laboratory Breeding Base of Systematic Research, Development and Utilization of Chinese Medicine Resources, School of Pharmacy, Chengdu University of Traditional Chinese Medicine, Chengdu, China.

School of Basic Medical Sciences, Jiujiang University, Jiujiang, China.

出版信息

J Cell Physiol. 2020 Mar;235(3):3069-3078. doi: 10.1002/jcp.29211. Epub 2019 Sep 23.

DOI:10.1002/jcp.29211
PMID:31549403
Abstract

Children are more sensitive than adults to bitterness and thus dislike bitter tastes more than adults do. However, why children are more sensitive to bitterness has never been revealed. To elucidate the effects of age on taste perception, a double-bottle preference test was first performed with immature and adult rats. Then, RNA-Seq analysis was performed on tongues obtained from rats of the same ages as those in the double-bottle test. The immature rats exhibited a lower consumption rate of bitter solution than the adult rats. Bioinformatics analysis yielded 1,347 differentially expressed genes (DEGs) between male adult rats (MARs, 80 days old) and male immature rats (MIRs, 20 days old) and 380 DEGs between female adult rats (FARs, 80 days old) and female immature rats (FIRs, 20 days old). These DEGs were mainly associated with growth, development, differentiation, and extracellular processes, among other mechanisms. According to Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis, the DEGs were enriched for bitter taste transduction. Specifically, the Gnb3 and TRPM5 genes were downregulated in FARs compared with FIRs and in MARs compared with MIRs, and the protein expression of TRPM5 was significantly downregulated in MARs compared with MIRs. The data presented herein suggest that transcriptional regulation of taste-associated signal transduction occurs differently in tongue epithelial tissue of rats at different ages, although additional analyses are needed to confirm this conclusion.

摘要

儿童对苦味比成人更敏感,因此比成人更不喜欢苦味。然而,为什么儿童对苦味更敏感还从未被揭示。为了阐明年龄对味觉感知的影响,首先用未成熟和成年大鼠进行了双瓶偏好测试。然后,对来自与双瓶测试中相同年龄大鼠的舌头进行了 RNA-Seq 分析。未成熟大鼠对苦味溶液的消耗量低于成年大鼠。生物信息学分析在雄性成年大鼠(MARs,80 天龄)和雄性未成熟大鼠(MIRs,20 天龄)之间产生了 1347 个差异表达基因(DEGs),在雌性成年大鼠(FARs,80 天龄)和雌性未成熟大鼠(FIRs,20 天龄)之间产生了 380 个 DEGs。这些 DEGs 主要与生长、发育、分化和细胞外过程等机制有关。根据京都基因与基因组百科全书(KEGG)途径分析,DEGs 富集了苦味转导。具体来说,与 FIRs 相比,FARs 中 Gnb3 和 TRPM5 基因下调,与 MIRs 相比,MARs 中 Gnb3 和 TRPM5 基因下调,并且与 MIRs 相比,MARs 中 TRPM5 蛋白表达明显下调。本文的数据表明,尽管需要进一步分析来证实这一结论,但不同年龄大鼠舌上皮组织中味觉相关信号转导的转录调控存在差异。

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